KEGG   Zymoseptoria tritici: MYCGRDRAFT_81468
Entry
MYCGRDRAFT_81468  CDS       T02285                                 
Name
(RefSeq) hypothetical protein
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
ztr  Zymoseptoria tritici
Pathway
ztr03018  RNA degradation
ztr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ztr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MYCGRDRAFT_81468
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MYCGRDRAFT_81468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ztr03019]
    MYCGRDRAFT_81468
   03041 Spliceosome [BR:ztr03041]
    MYCGRDRAFT_81468
Messenger RNA biogenesis [BR:ztr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MYCGRDRAFT_81468
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     MYCGRDRAFT_81468
Spliceosome [BR:ztr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    MYCGRDRAFT_81468
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 13397970
NCBI-ProteinID: XP_003850637
JGI: Mycgr3_81468
UniProt: F9XF32
Position
7:607093..607846
AA seq 81 aa
MSSQLLPLELIDRCVGSPIWVIMKGDKEFSGTLLGFDDFVNMVLEDVTEYDYSGAQTKLP
KILLNGNNVAMLIPGGMPDQN
NT seq 246 nt   +upstreamnt  +downstreamnt
atgtcctcgcaactgctcccgctagagctcattgacagatgtgtcggctcgccgatatgg
gtgatcatgaagggcgacaaggaattcagtggcactctactcggtttcgatgacttcgtc
aatatggtgcttgaagacgtgacggaatacgactactctggcgctcaaacgaagcttcca
aagattctcttgaatggcaataatgtggcgatgcttattccgggaggcatgccagaccag
aactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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