ID or terms query

Actinobacteria.57756 (71 sequences)

OC Root 2nd 3rd 4th 5th PC Gene/Definition
OC.379250 Bacteria.207883 Actinobacteria.57756 Mycobacterium.20061 Mycobacterium_sp_.6478 mjl.963 mjl:Mjls_0926 Rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Mycobacterium.20061   mdx.4024 mdx:BTO20_21475 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Rhodococcus.26381   rav.3855 rav:AAT18_20690 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41471   sco.4272 sco:SCO4246 SCD8A.19c; hypothetical protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41468   sgr.1275 sgr:SGR_2073 conserved hypothetical protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41468   sgb.4824 sgb:WQO_25155 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41471   scb.1943 scb:SCAB_27681 conserved hypothetical protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.80273 Streptomyces_sp_.21155 ssx.1722 ssx:SACTE_1773 Rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41470 Streptomyces_cattleya.5268 sct.6115 sct:SCAT_p0387 conserved protein of unknown function
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41470 Streptomyces_cattleya.5268 scy.7148 scy:SCATT_p13570 hypothetical protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41471   sfa.1745 sfa:Sfla_1780 Rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41472   sbh.8855 sbh:SBI_08986 Rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41472 Streptomyces_hygroscopicus.1289 shy.2364 shy:SHJG_2416 Rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41472 Streptomyces_hygroscopicus.1289 sho.2171 sho:SHJGH_2181 Rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41468   sve.5820 sve:SVEN_5841 Rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41471 Streptomyces_albus.738 salb.577 salb:XNR_0545 Rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41471 Streptomyces_albus.8014 sals.2298 sals:SLNWT_2279 rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41471 Streptomyces_sp_.66001 strp.4984 strp:F750_5057 hypothetical protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.96024   sfi.4678 sfi:SFUL_5295 Rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41468   sci.1183 sci:B446_06025 hypothetical protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41471   slv.3373 slv:SLIV_17155 hypothetical protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41468   sgu.2899 sgu:SGLAU_14705 hypothetical protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41468   svt.299 svt:SVTN_01555 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41468   scw.4636 scw:TU94_25725 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41471   sxi.2156 sxi:SXIM_21410 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41471   samb.3457 samb:SAM23877_3454 hypothetical protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41473 Streptomyces_sp_.15599 scz.1967 scz:ABE83_10245 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41472 Streptomyces_sp_.16880 scz.3322 scz:ABE83_17315 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41468   srw.3945 srw:TUE45_03997 Phage late control gene D protein (GPD)
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41471 Streptomyces_sp_.46982 strf.2999 strf:ASR50_15745 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41468   sle.1922 sle:sle_16600 sle_16600; Rhs Element Vgr Protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41471   spav.2943 spav:Spa2297_15020 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41471 Streptomyces_sp_.71334 strt.4419 strt:A8713_23065 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41471   sclf.5769 sclf:BB341_30035 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41471 Streptomyces_sp_.33241 strd.4014 strd:NI25_21540 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41472   snw.1411 snw:BBN63_07200 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41472   sauo.7499 sauo:BV401_40265 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41471   ssia.884 ssia:A7J05_04690 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41472   svu.3425 svu:B1H20_17915 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41468   svu.4907 svu:B1H20_25735 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41472   smal.7287 smal:SMALA_7332 rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41472   slau.5976 slau:SLA_6115 rhs element vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41471   salf.6694 salf:SMD44_06787 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41469   salj.6568 salj:SMD11_6743 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Streptomyces.41471   sfk.5435 sfk:KY5_5454c hypothetical protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Kitasatospora.9246   kab.5017 kab:B7C62_26275 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Agromyces.2952   agy.390 agy:ATC03_01960 hypothetical protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Arthrobacter.26454 Arthrobacter_sp_.27520 arq.4086 arq:BWQ92_22120 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Cellulomonas.2691   cfl.2226 cfl:Cfla_2267 Rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Cellulomonas.2691   cfi.183 cfi:Celf_0160 Rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756     mph.451 mph:MLP_03620 hypothetical protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Frankia.6640 Frankia_sp_.4366 fre.3595 fre:Franean1_3822 Rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756     nml.1868 nml:Namu_1906 Rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Amycolatopsis.3945 Amycolatopsis_mediterranei.4154 amd.4773 amd:AMED_4835 rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Amycolatopsis.3945 Amycolatopsis_mediterranei.4154 amn.4904 amn:RAM_24610 rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Amycolatopsis.3945 Amycolatopsis_mediterranei.4154 amm.4773 amm:AMES_4776 rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Amycolatopsis.3945 Amycolatopsis_mediterranei.4154 amz.4773 amz:B737_4776 rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Amycolatopsis.3945   aoi.3247 aoi:AORI_3245 rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Amycolatopsis.3945   aja.4500 aja:AJAP_22985 Hypothetical protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Actinosynnema.1864   ami.2899 ami:Amir_2945 Rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Actinosynnema.3827   ami.5213 ami:Amir_5384 Rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Actinosynnema.1864   apre.2823 apre:CNX65_14835 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Actinosynnema.3827   apre.5078 apre:CNX65_26815 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756     sesp.5090 sesp:BN6_51960 Rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756     sesp.6317 sesp:BN6_65160 Rhs element Vgr protein
OC.379250 Bacteria.207883 Actinobacteria.57756     led.4815 led:BBK82_25145 type IV secretion protein Rhs
OC.379250 Bacteria.207883 Actinobacteria.57756 Actinoalloteichus.2187   ahm.3424 ahm:TL08_17475 hypothetical protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Actinoalloteichus.2187 Actinoalloteichus_sp_.3252 acti.4168 acti:UA75_21245 hypothetical protein
OC.379250 Bacteria.207883 Actinobacteria.57756 Actinoalloteichus.2187 Actinoalloteichus_sp_.3252 acad.4067 acad:UA74_20755 hypothetical protein
OC.379250 Bacteria.207883 Actinobacteria.57756     all.3381 all:CRK58380 -
OC.379250 Bacteria.207883 Actinobacteria.57756     cai.4251 cai:Caci_4390 Rhs element Vgr protein

( plain text of OC.379250 )

Refinement of cluster

OC depth

Organism selection


Distribution of taxonomic categories


Neighbor clusters

OC.379248 (31) OC.379249 (3) OC.379250 (72) OC.379251 (5) OC.379252 (1) OC.379253 (1) OC.379254 (1) OC.379255-379263 OC.379264 (3) OC.379265 (7) OC.379266 (1) OC.379267 (1) OC.379268 (1) OC.379269 (1) OC.379242-379247 OC.379270-379278