Sequence Similarity Search

BLAST Search

BLAST	FASTA	KEGG2

Enter query sequence:

Sequence data

>cli:Clim_2156 K03403 magnesium chelatase subunit H [EC:6.6.1.1] | (GenBank) magnesium chelatase, H subunit (A)
MHFVFLTMEATNNSALKSAADELNRKYHLGLEVSLFNLGLRHDAPQWEKLEKAFRSADFI
FGSMLFSEEIVRPLEQLLEDASSQICIITSNPALLTRTRIGKFSLRKSGNAEKESGIFRQ
WAAKLKPKNSHGESQRQLAIARNIGKIMKYIPGRARDIHTFIAAHQFWLNGSQENMERFL
CLIADRYVPSWKGKLPQEDPVFYPDASLCHPDASGPFLSAGAFDAWQSKRRPLLNKGPVA
ILAMRSTVLSKNMHHLDYLVRDLESKGISACIAYCGGLDFRPVLDRFFDPEKPGSMKPEL
LINGTGFSLVGGPAENKAKEAIAALKKLNVPCYNLIPLSFQPVEQWQNNSHGLTPLQTAL
CVAVPELDGTIEPHVYAGTGNDRTIPLEREIRDITGRIDRFLRLRAKPAADKKIAIILFN
FPPNLGNAGTAAYLNVFESLMRLLKEMQHAGYHVEPPADIEELKDRLLEGNRLIYGTDGN
VAAHLSTEEYRKLFPACSGIEPFWGEAPGEILTDRNGFHVLGCSFGNIFIGQQPSFGYER
DPMRLLMAKDAAPNHAFAAFYTWLEHCFDADAVLHFGTHGALEFMPGKQAGLSSLCWPKK
LIGTLPNFYCYCVNNPSEGAIAKRRGFATLVSYLSPPLEQAGLYKGLRKLKELLASALKH
PDGELMLEIEALAAELEISTKKEEVSSEEYLAGLSSELYFIEERMIPLGLHIMGEAPSIE
SLVDHLALLVSHSRPELDNRSLPEIICGHKKLDYARLTDTLDSDRTALQTWQEILALTRE
AVRIFTGHLSSSGIKGNPGIRQLLENSLPVRISEADSYLHSKAGVKSGELQKLWTFLNVV
LGNIAENNEIHAVLQALDGTYIPPSPGNDLVRNPDIVPTGRNMHSLDPYSIPSAFAREAG
RRSAEELLEQYRQKHGALPESIALILWGTDNLKSDGEGIAQALALMGAQAMTDELGKTSD
VQLIPLAELGRPRIDVVITISGIFRDLLAPQVKLLDKAARMAASADESPDMNFVRKHVLL
EMQEKNCSFTDASNRVFSNAPGSYGANVNHLVESSSWEEEQQLADAFVNRKSFAATETGD
WKECPEALRSALRNVTLTFQNIDSYEIGISDIDHYYEYLGGVSKTVERISGSKPDILLGD
VNGFGTKQKIRPLEKMVALEARTKLLNPRWYEAMLEHGYEGVREIESHLSNTYGWSATAS
AVGDWTYQQFNETFLQDPAMLERLTKLNAHAVTAMTKRLLEANARGFWKTDEKTIEELRQ
LYEDLESRVEGIVDVQD

Select program and database:

BLASTP (prot query vs prot db)
BLASTX (nucl query vs prot db)

KEGG GENES

	Eukaryotes Prokaryotes Viruses
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KEGG MGENES

	Environmental Organismal
	Favorite samples

Microbial Reference Genes

Ocean (OM-RGC) Human gut (IGC)

nr-aa (GenBank, UniProt, RefSeq and PDBSTR)
Swiss-Prot UniProt RefSeq
PDBSTR
UniRef50 UniRef90 UniRef100
Virus-Host Database

BLASTN (nucl query vs nucl db)
TBLASTN (prot query vs nucl db)

KEGG GENES

	Eukaryotes Prokaryotes Viruses
	Favorite organism code or category

KEGG MGENES

	Environmental Organismal
	Favorite samples

KEGG GENOME

	Favorite organism code or category

Microbial Reference Genes

	Ocean (OM-RGC) Human gut (IGC)
	Ocean (MATOU)

EGENES
nr-nt (GenBank, EMBL and RefSeq)
     dbEST dbGSS HTGs dbSTS
     RefSeq
Ribosomal Databases
     SILVA (SSU, 16S/18S) SILVA (LSU, 23S/28S)
     PR2 (Protist Reference)
     RDP (Prokaryotic 16S) RDP (Fungal 28S)
EPD
Virus-Host Database
     CDS Genomes

Scoring matrix:

(except for BLASTN)

Filter:

Output options:

Set the maximum number of database sequences to be reported:
Set the maximum number of alignments to be displayed:

Optional parameters: (see manual for details)

E-value threshold
Alignment view:	(except for BLASTX)
Additional options:	(delimited by whitespaces)

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