BLAST Search
BLAST
FASTA
KEGG2
Enter query sequence:
Sequence data
>nhe:NECHADRAFT_103501 K11541 carbamoyl-phosphate synthase / aspartate carbamoyltransferase [EC:6.3.5.5 2.1.3.2] | (RefSeq) hypothetical protein (A) MSITSLPPASARQVGSEDDGLVCLELEDGSSFQGYSFGAKKSIAGELVFQTGMVGYPESV TDPSYRGQILVITFPLVGNYGVPSRETMDELLGDLPAHFESSQIHIAGLVTASYCGEDFS HFLAESSLGTWLKEQGVPAMYGVDTRALTKKIREKGSMLGKMRLEAPGLANGALNGQVDA PLAATPLEHFEQIDWVNPNTKNLVAEVSIKAPKLYKPPPSVARKHPSGRTIRVLCLDVGM KYNQLRCFLKRGVEVLVCPWDYDIASAIDEYDGLFLSNGPGDPAVLENTIKNIATVLENN KIPVFGICLGHQLLARASGARTTKMKFGNRGHNIPCTSMVTGKCHITSQNHGFAVDAASL TNGWKELFVNANDGSNEGIMHAEKPYFSVQFHPESTPGPRDTEFLFDVFINTIANCAENP ALLQAPVSFPGGTIEENERLHPRVSVRKVLVLGSGGLSIGQAGEFDYSGSQAIKALKEEG IYTVLINPNIATIQTSKGLADKVYFLPVNADFVRKVIQYERPDAIYVTFGGQTALQVGIQ LKDEFEGLGVKVLGTPIDTIITTEDRELFARSMDSIGEKCAKSASASNIDEAMHVVKDIG FPVIVRAAYALGGLGSGFANNEDELLDLCNKAFAASPQVLIERSMKGWKEIEYEVVRDAQ DNCITVCNMENFDPLGIHTGDSIVVAPSQTLSDEDYNMLRTTAVNVIRHLGVVGECNIQY ALNPFSREYCIIEVNARLSRSSALASKATGYPLAFIAAKLGLGIPLKEISNSVTKVTCAC FEPSLDYVVVKMPRWDLKKFTRVSTQLGSSMKSVGEVMSIGRSFEEAIQKAIRAIDFHNL GFGETKALMSIDDELQTPSDQRLFAIANAMHEGYTVDKIWELTKIDKWFLRKLKGLSDFA KKMTSYSTTDIATSPSILLQAKRLGFCDRQLAKFWSSNEIAVRRLRLEAGIQPFVKQIDT VAAEFPAFTNYLYMTYNASEHDVNFEDHGVMVLGSGVYRIGSSVEFDWCSVRAIRTLRAT GFKTIMVNYNPETVSTDYDEADKLYFENINLETVLDIYQLENSSGVLGAMGGQTPNNIAL PLHRAGVKVLGTSPEMIDNAENRYKFSRMLDRIEVDQPTWKELTSFEEAKAFCDKVSYPV LVRPSYVLSGAAMNTVYSEKDLETYLAQAAEVSREHPVVITKYIENAKEIEMDAVAKDGK VIGHFISEHVENAGVHSGDATLILPPQDLEQTTIDRIAEATRKIGAALNVTGPFNIQFIA KDNDIKVIECNVRASRSFPFVSKVMGVDLIEMATKAIMGQPFEEYPPTDLAPDCVGVKVP QFSFSRLSGADPVLGVEMASTGEVACFGVDKAEAYLKALMSTGFKIPKKNILLSIGSYKD KREMLPSIQKLEKIGYKLFATSGTADFLQEHGVQVQYLEVLGKEEDHSSEFSLTQHLAKN TIDLYINLPSNNKYRRPANYMSKGYQTRRMAVDYQIPLVTNVKNAKILIEAIARHFELEV SKRDYQTSHRTVVLPGLINIAAFVPGIVSPDSQDLQTVTKASISAGFSMIRVMPLGVDGA ITDALTLSAAQQNSRRGGYCDYNFSVAATSDNADQISHVTGEVGSLFIPFNHLSGNISKV AAVTAHFDAWPTHKPIVTDAKLTDLASILLLASLHNRRIHVTSVTNRDDIKLIALSKEKG LQVTCDVSIYSLYLSRDDYPECERLPTSADQAALWEHMSTIDVFSIGSLPFRLATTLGHK ADPSMGIADALPLLLTSVAEGRLTVDDIKARLYTNPMEIFELHEQVGTTIEAEIDRPYTV AAGEFWSPFEGRRMRASVQRVTFQDTTVCLDGEVLPVSPQGKDMSSHIAPPMSPPVKPTV SISQATESPQARRLSMLGGVKPLNRLRGVDAAVGATLPSPARGAAPVDELAPALHLQPLV SSSLQQLLSQPSAFKNTHVLSVKSYSRADLHLLFTVAQEMRLGVQREGVLNILRGRVLTT LFYEPSTRTSASFDAAMQRLGGRTIAVSTSHSSVQKGETLQDTLRTLACYGDAVVLRHPE ESSVHAAQKYSPVPVINGGNGSKEHPTQAFLDLFTIREELGTVQGLTITFLGDLLYGRPV HSLVYLLRHYHVQVQLVAPKALALPPKVREQLVASGQLLCESETLTPEIMARSDVLYCTR VQRERFPSEEEYQRVKNSYRVDNASLKHAKSSMIVMHPLPRNEEVAEEVDFDQRAAYFRQ MRYGLYCRMALLALVMAE
Select program and database:
BLASTP (prot query vs prot db)
BLASTX (nucl query vs prot db)
KEGG GENES
Eukaryotes
Prokaryotes
Viruses
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organism code or category
KEGG MGENES
Environmental
Organismal
Favorite
samples
Microbial Reference Genes
Ocean (OM-RGC)
Human gut (IGC)
nr-aa (GenBank, UniProt, RefSeq and PDBSTR)
Swiss-Prot
UniProt
RefSeq
PDBSTR
UniRef50
UniRef90
UniRef100
Virus-Host Database
BLASTN (nucl query vs nucl db)
TBLASTN (prot query vs nucl db)
KEGG GENES
Eukaryotes
Prokaryotes
Viruses
Favorite
organism code or category
KEGG MGENES
Environmental
Organismal
Favorite
samples
KEGG GENOME
Favorite
organism code or category
Microbial Reference Genes
Ocean (OM-RGC)
Human gut (IGC)
Ocean (MATOU)
EGENES
nr-nt (GenBank, EMBL and RefSeq)
dbEST
dbGSS
HTGs
dbSTS
RefSeq
Ribosomal Databases
SILVA (SSU, 16S/18S)
SILVA (LSU, 23S/28S)
PR2 (Protist Reference)
RDP (Prokaryotic 16S)
RDP (Fungal 28S)
EPD
Virus-Host Database
CDS
Genomes
Scoring matrix:
BLOSUM62
BLOSUM80
PAM30
PAM70
PAM250
(except for BLASTN)
Filter:
None
DUST in BLASTN, SEG in others
Output options:
Set the maximum number of database sequences to be reported:
Set the maximum number of alignments to be displayed:
Optional parameters:
(see
manual
for details)
E-value threshold
Alignment view:
Pairwise
master-slave with identities
master-slave without identities
flat master-slave with identities
flat master-slave without identities
Get ASN.1 for SeqAnnot
Get ASN.1 for the Blast Object
(except for BLASTX)
Additional options:
(delimited by whitespaces)
Feedback
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Kyoto University Bioinformatics Center