Sequence Similarity Search

BLAST Search

BLAST	FASTA	KEGG2

Enter query sequence:

Sequence data

>pno:SNOG_03803 K11422 [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354] | (RefSeq) hypothetical protein (A)
MSRSGQAISLSALTPLTTSSPSPRSAKTSYDTMNGTSSSRAAPSSAPENVANTITPVNTP
PETRKSVFPADGVMAKRILYDPYSDAKLEKKVRHSKPAQYKTVLDKGDPSPPPDPRLALA
GYTSGSYILKPTAKSKLRIAPYIAKPYAFDNRISCGPGPATQVVVTGFDPLTPDSQLRGF
FSTYGDVESLRAEVHPDNGSPLGICLIKFRDTPQARGSVAIKASTSAKRAEREGSNQRLG
QQVIKVHTDREGRRCAKLVELVVQKSRKQEENIRAKAAAKAAKASALATPATFDLPANVP
KGPSGRGARPPIPVPREPLNKKAALSHLIEKDPIKPKLKRAPYLFIAHQYVPVLSTTIDH
LKRRLKNFRWDALRCDQTGYYVVFASTKHGEDEAVRCFRECHMKPLFTYVMNMECQQYGD
PDYERSPSPERVMADKKRKAIEDRMDQEESADLELEKTQRAEAMDPVVAALEQLKQELQE
KILGDIKTRIAAPTLLELMQPERHVEKRRRLNIAEPRKKEEDIRPPSLLVPGLDPFGAGT
PKSRAAGFSGRGRKALGPYDRNRPGKKPPRIVNAFADERRKASAPKPRVARGLHRQMIEM
FEGPEESDDESRSNLTRGTEEQESRPISRAPSTDVEEEEEESSRAHRAKRRRIEAGWGED
SDDEMMDDSHARSLLAHCIHKDPENMAEKELEQVLAILPRSSPIWKKADKALKGFRRLRK
IEQEADAIFGVETSPVDKLDPEVIVTQDDEPSKPIETTELPETLKSLKKKQAAAKPKKKT
KKQLEEEAKSAKAEVTEISLPEEDIAEVKEHALVPEVSVTEDTPEEDDTGSVMWGVSSTE
PRKTVEDDFSVVMDIDGWQHMLKDEEDLLHLKAALQSIEAAKIGDAQSWAWKQKSIKHLN
RPGGEEGVSRTETKIEGYYVPNPTGSARTEGVKKIRESEKSKYLPHRIRVQREREERQRQ
AKKAEHAVISVEGFKFTTSSQKASTANSRANRANNRRMVNDINISKNMTGAEGDALRFNQ
LKKRKKLVKFDRSAIHNWGLYAQENIVANDMIIEYVGEKVRQRVADLREVRYDQQGVGSS
YLFRIDEDTVIDATKMGGIARFINHSCTPNCTAKIIRVDNTKRIVIYALRDIGQDEELTY
DYKFEREMDATDRIPCLCGSVGCKGFLN

Select program and database:

BLASTP (prot query vs prot db)
BLASTX (nucl query vs prot db)

KEGG GENES

	Eukaryotes Prokaryotes Viruses
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KEGG MGENES

	Environmental Organismal
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Microbial Reference Genes

Ocean (OM-RGC) Human gut (IGC)

nr-aa (GenBank, UniProt, RefSeq and PDBSTR)
Swiss-Prot UniProt RefSeq
PDBSTR
UniRef50 UniRef90 UniRef100
Virus-Host DB

BLASTN (nucl query vs nucl db)
TBLASTN (prot query vs nucl db)

KEGG GENES

	Eukaryotes Prokaryotes Viruses
	Favorite organism code or category

KEGG MGENES

	Environmental Organismal
	Favorite samples

KEGG GENOME

	Favorite organism code or category

Microbial Reference Genes

	Ocean (OM-RGC) Human gut (IGC)
	Ocean (MATOU)

nr-nt (GenBank, EMBL and RefSeq)
     dbEST dbGSS HTGs dbSTS
     RefSeq
Ribosomal Databases
     SILVA (SSU, 16S/18S) SILVA (LSU, 23S/28S)
     PR2 (Protist Reference)
     RDP (Prokaryotic 16S) RDP (Fungal 28S)
EPD
Virus-Host DB Genes
     Genomes
Environmental Viral Genome

Scoring matrix:

(except for BLASTN)

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Output options:

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Optional parameters: (see manual for details)

E-value threshold
Alignment view:	(except for BLASTX)
Additional options:	(delimited by whitespaces)

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