BLAST Search
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KEGG2
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Sequence data
>mtu:Rv1918c no KO assigned | (RefSeq) PPE35; PPE family protein PPE35 (N) atgcattactcagtgttgccgccggagatcaactcggccttgatcttcgccggggcgggc tccggaccgatgctggcggcggcgtcggcctgggacgggctggcaaccgaattagcctcg gctgctgtctctttcggctcggtgacagccgggctggtcggcgggtcgtggcagggtcgg tcatcggtggcgatggcagcggcggcagccccgtatgcggggtggctggccgcggcggcg acccaggccgagcaggcggccacccaggcccaggtgatggtggccgagttcgaggctgtg cggctggcgatggtacaaccggcgctggtggccgccaaccgttccggcctcatatcgctg gtgatatcgaacctttttggtcaaaacgctcccgcgatcgcggccgccgaagccgcatac gaggagatgtgggctctggatgtatcggcgatggcggcctaccattccggggcgtcggcg gtcgctgtggcgctaccggcattcgccctcccgctgcggcttccggcgggtctggcggcc gggcccgcggccgtggtgaccgcgctcaccacggccgtgggcatgccgacttttgccggc cgggcgatcgccgctagcctcggcttggccaacgtcggtggtggcaacctcggcaatgcc aacaatgggctcggcaacatcggcaacgccaaccttggcaacaacaatctggggtccggc aacttcggtagcttcaatatcggctcggccaacctaggtggcaacaacatcggcatagga aacgcgggcgccaacaacttcggacttgcaaacctgggcaatttgaacacgggattcgcc aatgcaggcatcggcaacttcggaattgcgaacaccggcaacaacaatatcggcaacggc ctgactggaaacaaccaaatcggcattggcggactcaattccggcaacggtaacgtcgga ttattcaacgcgggtagcgccaatatcggtttcttcaactccggcaatggcaactttggc atcgggaactccggtaacttcagcactggcctgttcaaccccggacacggcaacaccgga ttcctgaatgcgggctctttcaatacgggcatgttcgacgttgggaacgcgaacaccggc agcttcaacgtcggccactacaacttcggtgccttcaacccgggcccgtcgaacacgggt accttcaacacgggcggcgccaacaccggctggttcaacacaggaagcatcaacaccggc gccttcaacataggcgacatgaataacggcttgttcaacacgggcgacatgaacaatggt gtcttttaccgtggtgtgggccaaggcagcctgcagttcgccatcaccagccctgatttg acgcttccgtctctggaaatacccggaatctcggttcccgcgttcagcctgcccgcgata accttgccgtcgttgacgattccggcggtgacgacgccggccaacgttaccgtgggtgcg tttgatttgccggggttgacggtgccgtcgttgacgattccagcggcgatgacgccagct aacatcacggtgggtgcgtttgatttgccggggttgacggtgccgtcgttgacgattcca gctacaacgacaccagccaacatcacggtaggtgcgtttaacttgcctcagttgagtatt ccgtcggtgacggttccgccgatcacgattccggctggcacagcgctaggtgcgttcaat ctgccgacgctgagtattccgtcggtgacggttccgccgatcacgattccggctggcacc actgtcggcggatttacgctacccacgatacacaccccgttaataagtacaccccaaata agtataggcggctttagcactcccggcatagccacgcaagcaaattctggtgtcatcaat cttcccacctttagccttaacggcattacgataactaatttggtggtgttcattccgaac aacatcactgccttgcaaaccaatatgcccggggtattcccgcagattggcggcttcgct aatacacctcctgcctttattaatactgggaccattaccgtgggtggaggtcaaatcaac ggcgtcggcttctcgatcggcgcaatcaacgtcacccccttcaccctccccaacgtcgtc atccaaccgtggtccctcggggggatctcggtcgacgggttcaccctgccagagatcagc acccaagaattcaccactccggcgttgacgatcagtccgattggtgtcggtgcattgagc ctgccggatatcactactcaacagttcacgaccccggagttgaccatcgacccgatcacg ctgggtgggtttacgctgccgcagctcagcatcccggcgattaccaccccggcgttcacg atcgatccgatagcgctgggtggtttcacgcttcctcagatcatgacgcccgagataacg actccaccgttcgccatcgacccgatcggacttagcggtttcaccctcccccaggtcaat atcccggagatcaccacgccagagttcaccatccagccggtgggcttggcggccttcacc acacccgcactcaccatcgccagcatccacctgccgagcaccaccatgggcggattcgca atcccagcggggccgggatacttcaactcgagcgcaacgccctcgttgggctttttcaac gccggaatcggtgggaactcgggcttcggcaacagcggctcgggactgtcgggttggttc aacacaagtcctgttgggctgctagccggctcgggctaccagaactacggtggtcttatc tccggcttctccaaccttggcagcggcatatcgggcttcgccaacaccggcaccctgccg tttgccgtgaccagcttggtctccggtttggccaacatcggcaacaacctgtcgggcctg ttcttccagagcaccacgccataa
Select program and database:
BLASTP (prot query vs prot db)
BLASTX (nucl query vs prot db)
KEGG GENES
Eukaryotes
Prokaryotes
Viruses
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organism code or category
KEGG MGENES
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samples
Microbial Reference Genes
Ocean (OM-RGC)
Human gut (IGC)
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Swiss-Prot
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RefSeq
PDBSTR
UniRef50
UniRef90
UniRef100
Virus-Host Database
BLASTN (nucl query vs nucl db)
TBLASTN (prot query vs nucl db)
KEGG GENES
Eukaryotes
Prokaryotes
Viruses
Favorite
organism code or category
KEGG MGENES
Environmental
Organismal
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samples
KEGG GENOME
Favorite
organism code or category
Microbial Reference Genes
Ocean (OM-RGC)
Human gut (IGC)
Ocean (MATOU)
EGENES
nr-nt (GenBank, EMBL and RefSeq)
dbEST
dbGSS
HTGs
dbSTS
RefSeq
Ribosomal Databases
SILVA (SSU, 16S/18S)
SILVA (LSU, 23S/28S)
PR2 (Protist Reference)
RDP (Prokaryotic 16S)
RDP (Fungal 28S)
EPD
Virus-Host Database
CDS
Genomes
Scoring matrix:
BLOSUM62
BLOSUM80
PAM30
PAM70
PAM250
(except for BLASTN)
Filter:
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DUST in BLASTN, SEG in others
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