KEGG   Amycolatopsis albispora: A4R43_14485
Entry
A4R43_14485       CDS       T05547                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
aab  Amycolatopsis albispora
Pathway
aab03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A4R43_14485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aab03400]
    A4R43_14485
DNA repair and recombination proteins [BR:aab03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A4R43_14485
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A4R43_14485
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran AAA_29 AAA_16 RsgA_GTPase AAA_21 APS_kinase nSTAND1 AAA_22 DnaJ_CXXCXGXG NACHT Viral_helicase1 cobW NTPase_1 MeaB
Other DBs
NCBI-ProteinID: AXB43594
UniProt: A0A344L6C0
Position
complement(3140942..3143803)
AA seq 953 aa
MADRLVVRGAREHNLRGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARAGKPH
CPKCGEAISKQTPQQIVDQVLDMEPGVRFQVLAPVVRGRKGEYVDLFANLQQQGYSRVRV
DGAVHSLTDPPKLKKQEKHEIGVVIDRLTVKTSAKQRLTDSIETALRLADGLVELEFVDL
DEHDPHRIRGFSEHLACPNGHPLAVEDFEPRSFSFNSPYGACPECTGIGIRKEVDPELVV
PDDELSLGEGAVAPWAGGQSAEYFQRLLESLAETIGFRMDTPWRRLPARAQKAVLHGVNE
QVHVRYRNRYGRQRSYYANFEGVIPFLERRQEQTESEYMRERYEGYMREVPCPACQGTRL
KPEILAVTLEHRTHGPRSIAEVCALSVDEASEFLNGLALGKREAMIAGAVLKEIQARLQF
LLDVGLDYLSLDRASGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIE
TLTRLRDLGNTLIVVEHDEDTIRASDWVVDIGPGAGEHGGHIVHSGPYKKLLKNKQSLTG
DYLSRRREIEVPQIRRPIDRKRQLTVVGAREHNLRGLEVSFPLGCLVSVTGVSGSGKSTL
VNDILATVLANKLNGARQVPGRHTRIKGLDNVDKLVRVDQSPIGRTPRSNPATYTGVWDH
VRKLFAATTEAKVRGYQPGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCKGAR
YNRETLEVHYKGKTVSDVLDMPIEEAAEFFEPIKAIHRHLQTLVDVGLGYVRLGQPAPTL
SGGEAQRVKLASELQKRSTGKTVYILDEPTTGLHFEDIRKLLGVINGLVDKGNSVIVIEH
NLDVIKTSDWLIDMGPEGGSGGGTVVAQGTPEQVAETEGSYTGEFLREILTAG
NT seq 2862 nt   +upstreamnt  +downstreamnt
gtggctgatcgcctcgttgttcgcggtgcccgtgagcacaacctccgcggtgtcgacctc
gacctgccgcgggacagcttgatcgtgttcaccggcctctccggctccggcaagtcgagc
ctggccttcgacacgatcttcgccgagggccagcgtcgttacgtggagtcactctcggcc
tacgcccggcagttcctcggccagatggacaagcccgacgtcgacttcatcgagggcctc
tcgcccgcggtgtcgatcgaccagaagtccacctcgcgcaacccgcgctcgacggtgggc
accatcaccgaggtctacgactacctccgcctgctctacgcgcgcgccggcaagccgcac
tgccccaagtgcggcgaggcgatcagcaagcagaccccgcagcagatcgtcgaccaggtg
ctcgacatggagcccggcgtccgcttccaggtgctcgcgccggtggtccgcggccgcaag
ggcgagtacgtcgacctgttcgccaacctgcagcagcagggctactcgcgcgtccgggtg
gacggcgcggtgcactcgctgaccgacccgccgaagctgaagaagcaggaaaagcacgag
atcggcgtggtgatcgaccgcctgaccgtgaagaccagcgccaagcagcggctcaccgac
tcgatcgagaccgcgctgcgcctggccgacggcctggtcgaactcgagttcgtcgacctc
gacgagcacgacccgcaccgcatccgcggcttctccgagcacctcgcctgccccaacggc
cacccgctggccgtggaggacttcgagccgcgctcgttctcgttcaactcgccctacggc
gcctgccccgagtgcaccggcatcggcatccgcaaggaggtcgaccccgaactcgtggtg
ccggacgacgagctgtcgctcggcgagggcgcggtcgcgccgtgggcgggcggccagagc
gccgagtacttccagcggctgctcgagtcgctggccgagaccatcggcttccgcatggac
accccgtggcggcggctgcccgccagggcgcagaaggccgtgctgcacggcgtcaacgag
caggtgcacgtccgctaccgcaaccgctacggccgccagcgctcctactacgccaacttc
gagggcgtcatcccgttcctcgaacgccgccaggagcagaccgagtccgagtacatgcgc
gagcggtacgagggctacatgcgcgaggtgccgtgcccggcctgccagggcacccgcctc
aagccggagatcctcgcggtcaccctggagcaccgcacgcacggcccgcgctcgatcgcc
gaggtctgcgcgctgtcggtggacgaggcttcggagttcctcaacggcctggccctcggc
aagcgcgaggcgatgatcgccggcgcggtgctcaaggaaatccaggcccggttgcagttc
ctgctcgacgtcggcctcgactacctctcgctggaccgcgcctccggcacgctctccggt
ggtgaggcgcagcgcatccggctggccacgcagatcggctccggcctggtcggcgtgctg
tacgtgctggacgagccgtcgatcggcctgcaccagcgcgacaaccaccggctgatcgag
acgctgacccggctgcgcgacctcggcaacacgctgatcgtggtcgagcacgacgaggac
accatccgcgccagcgactgggtggtcgacatcggccccggcgccggcgagcacggcggc
cacatcgtccacagtggaccgtacaagaagctgctgaagaataagcagtcgctgaccggg
gactacctgtcgcggcgccgcgagatcgaggtgccgcagatccggcgcccgatcgaccgc
aagcgccagctgaccgtggtcggcgcacgtgagcacaacctgcgcggactggaggtgtcc
ttcccgctgggctgcctggtctcggtcaccggtgtctccggttccgggaagtccaccctg
gtcaacgacatcctggccaccgtgctggcgaacaagctcaacggcgcccgccaggtgccc
ggccggcacacccggatcaagggcctggacaacgtggacaagctggtgcgggtggaccag
tcgccgatcggccgcaccccgcggtcgaacccggccacctacaccggcgtgtgggaccac
gtgcgcaagctgttcgcggccaccaccgaggccaaggtgcgcggctaccagccgggccgg
ttctcgttcaacgtcaagggcggccgctgcgaggcgtgcgccggtgacggcacgatcaag
atcgagatgaacttcctgccggacgtctacgtgccgtgcgaggtgtgcaagggcgcgcgg
tacaaccgcgagacgctcgaggtgcactacaagggcaagaccgtctcggacgtgctggac
atgccgatcgaggaggccgcggagttcttcgagccgatcaaggcgatccaccgccacctg
cagaccctggtcgacgtcggcctcgggtacgtccggctcgggcagccggcgccgacgctg
tccggtggtgaggcgcagcgcgtcaagctggccagcgagctgcagaagcggtccaccggc
aagacggtctacatcctggacgagccgaccaccgggctgcacttcgaggacatccgcaag
ctgctcggggtgatcaacggcctggtggacaagggcaactcggtgatcgtgatcgagcac
aacctggatgtgatcaagacctccgactggctgatcgacatgggccccgaaggtgggtcc
ggcggtggcacggtggtcgcgcagggtacaccggagcaggtggccgagaccgaaggcagc
tacaccggggagttccttcgggaaatcctcaccgcgggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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