KEGG   Arthrobacter alpinus R3.8: AOC05_11935
Entry
AOC05_11935       CDS       T04095                                 
Name
(GenBank) ABC transporter
  KO
K03701  excinuclease ABC subunit A
Organism
aaq  Arthrobacter alpinus R3.8
Pathway
aaq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aaq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AOC05_11935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aaq03400]
    AOC05_11935
DNA repair and recombination proteins [BR:aaq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AOC05_11935
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AOC05_11935
SSDB
Motif
Pfam: UvrA_DNA-bind ABC_tran AAA_21 AAA_29 SMC_N AAA_16 nSTAND1 AAA_25 RsgA_GTPase ATPase AAA_33 DUF4350 Viral_helicase1
Other DBs
NCBI-ProteinID: ALE92838
UniProt: A0A0M4RQB0
Position
complement(2661307..2663838)
AA seq 843 aa
MNSIGQDGQILAAPGIHDGFVHVRGANENNLKNVEVRIPRDAIVAFTGVSGSGKSSLAFG
TIFAEAQRRFLESVAPYARRLIAQGHTPNVEFISGLPPAVALQQRRGTASSRSTVGTLTT
LSNSVRMLYSRAGHYPQGATRLDSDSFSPNTVVGACPACHGLGILHTVTEDSLVPDPSLS
IREGAIAAWPGAWQGKSLRDITTQLGYDVDVPFKKLPKEAREWLLFTDEQPVVEVTPERD
RVAKPYKGRFWSARRSVLHTVAESKSEMMRAKALQFMHSGPCPTCAGTGFRPEALGVTVA
GLNIAQFNETPLDSLAGVLRQLSVLERDGQPASDVSASISADLLERIEVLTRLGLGYLSL
KRGTTTLSPGEMQRLRIATQLRSGLFGVIYVLDEPSAGLHPADAQPLLEVLEALKAAGNS
VFVVEHNMDVVASADWIVDVGPRAGAGGGLVLYSGPVAGLEEVPESVTRKFLGHPSSNEG
IREPREGVRWLELEGVHLHNLVGLDARFPLGVLSAVTGVSGSGKSTLVSQALAQGMAQTL
HGEMPGLLAASEGTNGQETDTEVNHAVIGAVRGAEGIDRVVAMDQKPIGRTPRSNLATYT
GLFDAVRKTFAETELAKERGYGAGRFSFNVAGGRCENCLGEGHLEIELLFLPGSYGPCPV
CHGSRYNPETLEVTYEGKNIAEVLELSVDEAADFLAGIPAAARSLTTLREVGLGYLTLGQ
PAPELSGGEAQRIKLATELQRARRGHTLYLLDEPTTGLHPADVQLLLGQLNRLVDAGNTV
IVVEHHMDVVAAADWVIDLGPAGGDAGGRIVATGTPAQIAVEPDSRTSHYLARRLGLEPL
PAS
NT seq 2532 nt   +upstreamnt  +downstreamnt
atgaacagcattggacaggacggccagatccttgccgcgcccggaattcatgacgggttc
gtgcatgtgcgcggtgcgaacgaaaacaacctgaaaaacgtcgaggtgcgcatcccgcgt
gatgccatcgtcgccttcaccggggtttcgggttcagggaaatcttccctggccttcggc
acgatctttgccgaggcgcagcgccgctttctggaatcggttgcgccctatgcccggcgg
ctcatcgcccaaggccacaccccgaacgtcgagttcatctcggggctgccaccggcggtg
gccctgcaacagcgccgcggcaccgcctcttcacgctcgacagtcggcaccctgaccacc
ctgtccaactcggtgcgaatgctctattcgcgtgcagggcactacccgcagggggccact
cggctggattcggattcgttctcgccgaacaccgtggtaggtgcctgtccggcgtgccac
gggctcggcattctccacaccgtcaccgaggattccctggtgcctgatccatcgctgagc
atccgcgagggtgctatcgccgcatggcccggcgcctggcagggcaagagcctgcgcgac
atcaccacgcagctcgggtacgacgtggatgtgcccttcaagaagttgccgaaggaggcg
cgcgagtggctgctgttcaccgacgagcaaccggtggtcgaggtgactccggagcgcgac
cgcgtcgccaagccgtacaagggacgcttctggagcgcgaggcgctcggtattgcacacc
gtggccgaatcgaagtccgagatgatgcgtgccaaagcacttcaattcatgcactccgga
ccatgcccgacgtgcgccggaaccgggttccgcccggaggcgctcggggtcaccgttgcg
gggctgaacatcgcacagttcaacgaaacgccactggattcactggccggggtgctgcgt
cagctctcggtccttgaacgcgacggacaaccggccagcgacgtgtccgcctcgatctcc
gcggacctgcttgagcgtatcgaggtgcttactaggctgggcctgggttacctgagcctg
aagcgcgggactacgacgctttcccctggggaaatgcaacgcctgcgcatcgccacccag
ctgcgttcgggactcttcggagtgatctacgttctggacgaaccctcggccgggttacac
cccgccgacgcccaaccgctgcttgaggtactcgaggcactcaaggcggccggcaactct
gtgttcgtggtggaacacaacatggatgtggtggccagtgccgactggatcgtcgatgtg
ggtccgcgggccggcgccgggggcggcctggtgctctacagcggaccggttgccggtttg
gaggaagttccggagtcggtgacccgcaagttcctgggccatcccagcagcaacgagggt
atccgggaaccgcgtgaaggggtccgatggctggaattggagggcgtacacctgcataac
cttgtgggactggatgcgaggttcccgctgggtgtactcagtgctgtcaccggggtctcc
ggctccggaaagtccaccctggttagccaggcgctggcacaaggtatggcccagactttg
cacggtgagatgccggggctattggccgcgtccgagggaaccaacggccaggaaacggac
accgaggtcaaccatgcggtgatcggtgctgtgcgaggcgccgagggtatcgatcgcgtc
gtggcgatggaccaaaaaccgatcggcaggaccccgcgctcgaacctggcgacttacact
ggactcttcgacgcagtgcgcaagaccttcgcggagaccgagctggccaaggaacgcggc
tacggagcgggccgcttctccttcaacgtcgccggcggacggtgcgagaactgcctagga
gagggccacctggaaatcgagttgctcttccttcctggcagctatggtccctgcccggtc
tgccatggttcgcgctacaaccccgagacgctcgaagtcacctacgagggcaagaacatt
gccgaggtgctggaactgagcgtggatgaggcggccgatttcctggcagggatccctgct
gcggcacggtcattgaccactttgcgcgaggttggactgggatacctgacactgggccag
cctgcacccgagctctccggtggcgaggcccaacgcatcaagctggccaccgaattgcag
cgcgcgaggcgcggacacacgctctacctgcttgatgagccgaccaccgggctgcacccg
gccgatgtgcagttgctgttggggcagttgaaccggctggtcgatgccgggaacacggtg
atcgtggtggagcaccacatggacgtggtggccgctgcagactgggtcatcgacctggga
ccggcgggaggggatgccgggggcaggatcgttgccaccgggacgccggcgcagatcgct
gtggaaccggattcccggacgtcgcactaccttgcgcgacggctgggattggaaccgctg
ccggcctcgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (21)   

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