KEGG   Alcaligenes aquatilis: D3M96_01605
Entry
D3M96_01605       CDS       T05678                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
aaqu  Alcaligenes aquatilis
Pathway
aaqu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aaqu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    D3M96_01605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aaqu03400]
    D3M96_01605
Enzymes [BR:aaqu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     D3M96_01605
DNA repair and recombination proteins [BR:aaqu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     D3M96_01605
SSDB
Motif
Pfam: PriA_3primeBD DEAD PriA_C ResIII Helicase_C PriA_CRR AAA_30 AAA_16 AAA_22 zinc-ribbons_6 TetR_C_31 PIF1 DUF3638 AAA_19 zf-IS66
Other DBs
NCBI-ProteinID: AYN19345
UniProt: A0A3G2HQR5
Position
358723..360816
AA seq 697 aa
MTATPDAISASASTGPFWLHVALDVPLDGVFDYQHHEPVLVGQRVIVHFGRRQMIGVVVA
LPEQPSYPPEQVKSIDQLLDDLPPFPEDWLRMARFASTYYHRPLGEAMMPSLPGPLRKPS
AYLGKRSAGGPVLRMAKRKEKKVEPVDSDVLPVLNAEQQAAVDGIVAAKPGSCLLLHGVT
GSGKTEVYMRVLEHVLAAGRQVLFMVPEINLTPQFEQVLRARLARVLPGDVLAVLHSGLS
EGERLRSWLRVNSGQARILLGTRLSIFTPMPELGLIIVDEEHDASYKQQDGLRYSARDLA
VWRGYDLKVPVVLGSATPSLESWNHARQGRYSLLSLPKRAREVSLPRVRLVDTRHLRLDS
GFSPQLLDALEACLDRGEQSLVFINRRGYAPVLHCASCGWLSQCPRCTVYTVLHRQNGFK
HNLQCHHCGYQAPVPRACPDCGDQDLQPMGRGTQRIEEFLGERFPNARLVRIDADSTRLK
GSAQQLFEQVHAGEVDIMVGTQMVAKGHDFTRLSVVGVLNADATLFAHDFRAPERLFAQL
MQVAGRAGRHTEGADVIIQTGYPEQAVYQSLIKHDYIGFAQSALNERESVGLPPFAYQVL
LSAEAPQLADAIRLLTQARRLPEDYPNEFPGADQVFLYDPVPLRVLRVAKVERAQLLLES
AHRPALQAFVRYWGPQVAQLAKQHKVRITIEVDPLEI
NT seq 2094 nt   +upstreamnt  +downstreamnt
atgaccgccactcctgacgctatttctgcatcggcaagcaccggacctttctggctgcat
gtggctttggacgtccccctggatggggtgtttgattatcagcaccacgaacctgttctg
gtcgggcagcgggtcattgtgcattttgggcggcggcagatgataggggtggtggtggcc
ttgccggaacaaccttcctacccgcccgagcaggtcaagtcgattgatcaattgctggat
gacttgcctccttttccggaagactggttgcgaatggcgcgctttgcgtccacctattac
caccgtcccttgggcgaggccatgatgccgtccttgccagggcccttgcgtaaaccttct
gcctatctgggcaagcgttccgcaggtggtccggtactgcgtatggccaagcgcaaggaa
aagaaggtggagccggtggacagcgatgtcctgcctgtgctcaatgccgaacagcaggct
gcggtcgatggcattgtggcggctaaacccggtagctgcctattgctgcatggcgtaacg
ggtagcgggaaaaccgaagtctatatgcgggtgctggaacacgtgctggctgctggtcgg
caagtcctgttcatggtgcccgaaatcaatctgacgcctcagttcgagcaggtcttgcgg
gcacgattggcgcgcgtgctgcctggtgatgtgttggctgtcctgcacagtggcttgtct
gaaggcgagcggctgcgctcctggctgcgcgtcaatagtggtcaggctcgcattttgcta
ggaacacggctgtccatcttcacgcccatgcccgagctgggcctgattattgtggacgag
gaacacgatgcctcttacaagcagcaagatggcttgcgctactccgctcgggatctggcc
gtgtggcgtggctacgatctgaaagtgccggtggtgctgggctccgccacaccttcgctg
gaaagctggaatcatgcccggcaagggcgctatagcctgctgagcctgcccaaacgtgcc
cgcgaggtctctttgccgcgagtgcgcctggtcgacacccgtcatttgcggctggattcg
ggtttttctcctcaactgctggatgcgctggaagcgtgtctggatcggggcgagcagtcg
ctggtttttattaaccgacgtggctacgcgcctgtgctgcattgtgcctcttgcggctgg
ctgtcccaatgtccgcgctgcacggtttacaccgtgctgcataggcaaaatggcttcaag
cataatttgcagtgtcatcactgtggttatcaagcgcctgtgccgcgtgcttgcccggat
tgtggcgatcaggacctgcagcccatgggccggggtacgcagcggattgaagagtttttg
ggtgagcggtttccgaatgctcgcctggtgcgtattgatgcggacagcacccgcttgaag
ggcagtgcgcagcaattgttcgagcaggttcatgcaggtgaagtggatatcatggtgggc
acccagatggtggccaaaggccatgactttacgcgcttgagcgttgtcggcgtgttgaat
gcagatgccaccttgtttgcccatgatttccgtgcgcccgagcgcttgtttgcgcaactg
atgcaggtggcaggccgagcaggccgtcatactgaaggggcggatgtcatcatccagacg
ggctacccggagcaggctgtttatcaaagtctgatcaaacacgattacattggctttgcc
caaagcgccttgaacgagcgcgagtcggtgggtttgccgccttttgcttatcaagtgctg
ctgtcggccgaagcgccgcagttggccgatgccattcgcttgctgacgcaggcacgacgc
ttgcccgaagactatccgaacgaatttccaggcgcggatcaggttttcctgtacgatcct
gtgcctttacgcgtgttgcgcgttgccaaagtcgagcgcgctcaactgttgttggaaagc
gctcatcgcccggccctgcaggcctttgtacgatactgggggccgcaggtcgcgcagttg
gccaagcagcataaagtgcgtattacgatcgaggtcgaccccctcgagatctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system