KEGG   Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT97612
Entry
AGABI1DRAFT97612  CDS       T03136                                 
Symbol
AGABI1DRAFT_97612
Name
(RefSeq) hypothetical protein
  KO
K12587  exosome complex component MTR3
Organism
abp  Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AGABI1DRAFT97612 (AGABI1DRAFT_97612)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abp03019]
    AGABI1DRAFT97612 (AGABI1DRAFT_97612)
Messenger RNA biogenesis [BR:abp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     AGABI1DRAFT97612 (AGABI1DRAFT_97612)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 18832934
NCBI-ProteinID: XP_007326612
JGI: Agabi_varbur_1_97612
UniProt: K5XGU6
Position
Unknown
AA seq 261 aa
MALSNFDRRRVNGPEDSFAPVYAPQNDQNERDPFQRRKRGPLDVRPIFLQPGLITQANGS
AYIETEHTKIACAVYGPRQSKNVSYSESGHLNVEVKFAPFSCRRRRAPLRDAEDRTIAIA
VHQAIVSSVRLELLPKSTIDVFVTVIEADGIEGVIASASIAVSTALADAGIEIFGLVVSC
SASLIGGGIWLDPSEDEVSCSEGTIIVSCIPALGTVTSVWQGGQIPPKSVVDAMEKCQSR
CTDIHKIVAQALRGYSSHNPT
NT seq 786 nt   +upstreamnt  +downstreamnt
atggccctctcaaattttgaccgacggcgagtgaatggacccgaagacagttttgcacca
gtgtatgcccctcaaaatgatcagaatgaacgggatccatttcaacggaggaagagaggt
ccactggacgttcgaccaatttttttgcagcctggcttgatcacccaagctaatggatcc
gcctacatcgaaactgaacatacgaagatagcttgtgccgtctatggaccccgacagtcg
aaaaacgtgtcgtatagcgagagtggacatctcaatgttgaagtaaaatttgcccccttt
tcttgccggcgtcgacgagcgccgttacgggatgccgaagatcgaacaattgcaatagca
gttcaccaagctatcgtttcttctgtcagactcgagctgctacccaaatcaacaatcgat
gttttcgtcacagtaattgaagccgatgggattgagggtgtcatcgcctcggcctccatc
gctgtgagcaccgcactagcagatgccgggattgaaatatttggattggttgtatcgtgc
tctgcttccttaatcggcggtggaatttggctcgacccaagcgaagatgaagtaagttgt
tcagagggtacaatcatcgtatcctgcatcccagccctaggaaccgtgacaagcgtctgg
caaggcggccaaatccctcccaaaagtgttgtcgacgctatggagaaatgtcaaagccgt
tgcacagatatacataagatcgtagctcaggcgctccgtggatactctagccacaatcct
acctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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