KEGG   Paracholeplasma brassicae: BN85309020
Entry
BN85309020        CDS       T03095                                 
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS, truncated
  KO
K07456  DNA mismatch repair protein MutS2
Organism
abra  Paracholeplasma brassicae
Pathway
abra03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:abra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    BN85309020 (mutS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:abra03400]
    BN85309020 (mutS)
DNA repair and recombination proteins [BR:abra03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     BN85309020 (mutS)
SSDB
Motif
Pfam: MutS_V MutS_III
Other DBs
NCBI-ProteinID: CCV65923
UniProt: U4KRP6
Position
complement(987378..989063)
AA seq 561 aa
MSYALKTLEFNVILNEISKYAYTQTIKKEIMDLTPYKSIEQVKHELLQSNEALNVIYRIG
SFALIDDFDIDSILNSLKLNRVLSITDVLQLRLFISMTQDVILQEKEFVKLKIVYESLRS
LFEGLDPLKEVKKEIESILDPDGVVLDTASDALNQLRKEIKKLEQSRKEKLNQILVKKSS
MLNENVIVIRNDRYCLPVKKEYKHAFKGILQDESSSGTTCYIEPIETVEVTLKIQRFVFD
EQQEILRIMTALSKFLADYIDPLEDNLASLLRLDFIQAKAKYAKSIDANLVSINEEGYIN
LVKARHPLLDPKNVVPIDLTLDKEKKTIMITGPNTGGKTVGLKTVGLLSLMAQSGLLVPA
KETSSLSLFDGIYADIGDEQSIVQSLSTFSSHMTKIKHILSVARDNILVLFDELGSGTDP
IEGSALAMGILDYLEPYDLRMIVTTHYSQLKLYAYTHPHISNASVAFDLETLKPLYHINF
GISGSSNALIIAERLGIHLKVIEIARNYMQDKDSDLSKTVKLFEEETLLVKEKEEALSKR
LIELENQIVAYEQKNKANRDR
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgagttatgcccttaaaacattagaattcaatgtaatactaaacgaaattagtaaatat
gcctatacccaaacaataaaaaaagagattatggacttaacgccctataaatcgattgaa
caggtaaaacatgaattgcttcaaagcaatgaagcattaaacgttatttatcgtattggg
tcgttcgctttaatcgacgattttgatatcgattctatattgaattcactaaaattaaat
cgcgtgttatcaattacggatgttttacaacttcggctttttatttcaatgactcaagac
gttatattgcaagaaaaagagtttgtaaaacttaaaatcgtttatgaatcgttacggtct
ttatttgaaggtttagacccgttaaaagaagttaaaaaagagattgagtcaatacttgat
ccagatggcgttgtattagatacagcatcagatgcattaaatcaactaagaaaagaaatt
aagaaattagaacaatcaagaaaagaaaagttgaatcagattctagttaaaaaaagttca
atgttaaatgagaacgtcatcgtcataagaaatgaccgttattgcttacccgtcaaaaaa
gaatacaagcacgcatttaaagggatacttcaagacgagtcaagcagtggaacgacttgt
tacatcgagccaatcgaaaccgtcgaagtgactttaaaaatacaacgattcgtttttgac
gaacaacaagagattcttcgtattatgactgctttatctaagtttcttgcggattatatt
gaccctcttgaagataatttagcttctttattaagacttgattttatacaagcaaaggcg
aaatatgctaaatccattgatgcaaatttagtttcaatcaatgaagagggttacattaat
cttgtcaaagcaaggcacccgttattggatcctaaaaacgtcgtaccaatcgatttaacc
ttagataaagaaaagaaaaccatcatgattaccggtccaaataccggtggtaagacggtc
ggtttaaaaacggtcggtttactatcattaatggctcaatcagggcttttagttcctgcg
aaggagacaagttcactttcattgtttgatggcatctacgccgatataggggatgaacaa
tcaatcgttcaatcgttatcgactttctcgtctcacatgacaaaaataaaacacatcttg
tccgttgcacgcgataacattcttgtgttgtttgatgaattaggtagcggaactgatcca
atcgagggtagtgcgctcgcgatggggattctggattacttagaaccttatgatttacgt
atgattgtaacaacgcactattcacaattaaagttatacgcatacacacacccacacatt
tcaaatgcgagtgtggcgtttgatttagagaccttaaaaccactgtaccatatcaatttt
ggtatttctggttcatcgaatgccttaattattgcagaacgtttaggcattcatttaaag
gtaatcgaaattgcaagaaattacatgcaagataaagactctgacttatcaaaaacagtc
aagctgtttgaagaagagacacttttagtcaaagaaaaagaagaagcattaagcaaacgt
ctgattgaattagaaaaccaaatcgttgcttatgaacaaaaaaacaaggcaaatcgagat
agataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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