KEGG   Aliarcobacter butzleri ED-1: ABED_0199
Entry
ABED_0199         CDS       T01823                                 
Name
(GenBank) MiaB-like tRNA modifying enzyme
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
abt  Aliarcobacter butzleri ED-1
Brite
KEGG Orthology (KO) [BR:abt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:abt03009]
    ABED_0199
Enzymes [BR:abt01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     ABED_0199
Ribosome biogenesis [BR:abt03009]
 Prokaryotic type
  ribosomal protein modification factors
   ABED_0199
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM_2 CLP1_P Pirin_C_2
Other DBs
NCBI-ProteinID: BAK69916
Position
complement(202642..203982)
AA seq 446 aa
MKFSTQKPKKTLHMVSLGCTKNLVDSEVMLGRLSDYQLTDDAQNADVIIVNTCGFIDSAK
QESINTILSLHEDRKTESVLVMAGCLSERYKEELQKELPEIDVFTGVGDYDKIDELVNEK
RSNFTSEVFLASENNERIITGSSYHAYVKLSEGCNQACSFCAIPSFKGKLHSRTLQSLVK
EVKALVAKGYVDFSFVSQDSSSFLRDLDIKNGLELLIEEVEKIEGIKTARILYLYPSTTT
LSLIDKIADSKVFVNYFDMPLQHITPSMLKIMKRGKGVEQLNELMNHMKSKPNSFVRTTF
IAGHPGETEDDFETLCDYVENFKFDRANVFSYSDEEGTTAETRTDKVEQELIDERAEVLG
EIISQTTQESLESEVGKTFEVYIDGESEEHEYLLSARKTIWAPSIDGEIYINDNELSEGE
QIKFGQIYTVKVTELVGDKLLATVIK
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgaaattttcaacacaaaaacctaaaaaaactctgcatatggtaagccttggctgtaca
aaaaacttagtagatagtgaagttatgcttggacgattaagtgattatcagctaacagat
gatgcacaaaatgcagatgtaattatagtaaatacttgtggatttatagatagtgcaaaa
caagaaagtatcaatacaattttaagtcttcatgaagatagaaaaactgaatctgtttta
gttatggctggatgtttaagcgaaagatataaagaagagttacaaaaagagcttccagaa
attgatgttttcactggagttggtgattatgataaaatcgatgaacttgtaaatgaaaaa
agaagtaattttacttctgaagtatttttagcaagtgaaaacaatgaaagaataataaca
ggttcttcatatcatgcttatgtgaaactaagtgaaggctgtaatcaagcttgttcattt
tgtgcaattccttcatttaaaggtaaacttcactcaagaactttacaatcacttgtaaaa
gaagtaaaagctcttgtagcaaaaggatatgttgatttctcttttgtatctcaagactca
tcttcatttttaagagatttggatataaaaaatggacttgaacttctaatagaagaagtt
gaaaaaattgaaggtattaaaacagctagaattttatatctttatccatcaacaacaact
ttatctttgattgataaaattgctgattcaaaagtttttgtaaactattttgatatgcct
ttacaacatataactccttcaatgttaaaaattatgaaaagaggaaaaggtgttgagcaa
ctaaatgaacttatgaatcacatgaaaagtaaaccaaactcttttgtaagaacaacattt
attgctggacatccaggagagactgaagatgattttgaaacactttgtgattatgtagaa
aacttcaaatttgatagagcaaatgtattttcatactctgatgaagagggaacgactgct
gaaactagaacagataaagttgaacaagaattaatcgatgaaagagctgaagttttagga
gaaatcatttctcaaactacacaagagtcactagaaagtgaagttggaaaaacttttgaa
gtttatattgatggtgaaagtgaagaacacgaatatctattaagtgctagaaaaactatt
tgggctccaagtattgatggtgaaatttatataaatgataatgagttaagtgaaggtgag
caaatcaaatttggtcaaatttatactgtaaaagtaactgaacttgttggagataaatta
cttgcaacagtaatcaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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