KEGG   Aliarcobacter butzleri RM4018: Abu_2085
Entry
Abu_2085          CDS       T00600                                 
Name
(GenBank) ATP-dependent DNA helicase, UvrD/PcrA family
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
abu  Aliarcobacter butzleri RM4018
Pathway
abu03420  Nucleotide excision repair
abu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:abu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Abu_2085
   03430 Mismatch repair
    Abu_2085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:abu03400]
    Abu_2085
Enzymes [BR:abu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Abu_2085
DNA repair and recombination proteins [BR:abu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Abu_2085
   MMR (mismatch excision repair)
    Other MMR factors
     Abu_2085
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 PcrA_UvrD_tudor eIF3_p135 AAA_11 CarD_TRCF_RID
Other DBs
NCBI-ProteinID: ABV68302
UniProt: A8EWH9
Position
complement(2084856..2086910)
AA seq 684 aa
MFENLLISLNDSQKIAAQHVDGPLLILAGAGSGKTKTITTRLAFLISIGIDPSSILTLTF
TNKAATEMRERAFSLLDSSKIFTPPLLCTFHKFGLLFLKFHMSELERKNNFIIIDTDDKK
RILKSINKEIPSALLASEVSKYKNSLMSPSEVKATAQLKLYQEIAQIYEDYENYLEKNNL
VDFDDLLLLPYKILKNNENLAKQISQKYQYIMVDEYQDTNELQYRLLRLLCSSHNNLCVV
GDDDQSIYGWRGATIKNILNFSDHFENSLVIKLEDNYRSTDTILNHANQLIEHNRDRLGK
KLIGTRTKGDSIRIYESNDENDETRKIVEDIKKLIDSGENPKNIAILFRVNALSRSLEEG
FNKAGLHYKLVGGMKFYERSEIKDLIAYFRILTNLNDNFSIKRIINKPKRGIGKTTIEKL
EEKSIETGKSIFDLIQELDAEGISLIVGKKNARTLKVFEASILDLRESLTQSKMRFLDNF
EETFDYRASYDNLPDGFERQANIDEFYGYIRDYFIQNPHLDLKDFLNEIALESENDDYSG
EAVSMMSVHASKGLEFKNLFIIGLEEGFFPITGDGSDLEEERRLGYVAITRAKDNLTLSF
VHSRFYKGKRTVLSKSRFLSESGLIKGSLTIQKQADFKKGDIVSHKIFGMGRVEKVTSAG
KDYKLTINFGGTKRDILSSFVEKA
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgtttgaaaatctgttaatatcattgaatgattcacaaaaaattgctgctcaacatgtt
gatggtccgctacttattcttgcaggagcaggaagtgggaagacaaaaactatcacaaca
agacttgcttttttaatatctattggtatagatccaagttcaattttaactttaactttt
acaaataaagcagcaactgagatgagagaaagagctttttctttgcttgattcatctaag
atatttactccacctttactttgtacttttcataaatttggtttactattcctaaaattt
catatgagtgaattagagaggaaaaacaattttattataattgatacagatgataaaaaa
agaattttaaaatcaatcaacaaagagataccttctgctcttttagcttcggaagtttca
aaatataaaaactcattaatgtctccaagtgaagttaaggctactgctcagttaaaactt
tatcaagaaatagcacaaatctatgaagattatgaaaactatttagaaaaaaacaatcta
gttgattttgatgatttacttcttcttccttacaaaatattgaaaaacaatgagaattta
gcaaaacaaattagtcaaaaatatcagtatattatggtagatgaatatcaagatacaaat
gagttgcaatatagacttttaagacttttatgctcaagccataacaatctttgtgtagtt
ggtgatgatgaccaatctatttatggatggcgtggtgcgactataaaaaacatattgaac
ttttctgatcattttgaaaatagtttagttataaaactagaagataattatcgttcaaca
gatactattttaaatcatgcaaatcaattaatagagcataatagagatagattaggaaaa
aaattaataggaactagaacaaaaggtgattctataagaatttatgaatcaaatgatgaa
aatgacgaaacaagaaaaattgtagaagacataaaaaaacttatagatagtggagaaaat
cctaaaaatatagcaattttatttagagtaaatgcactctcacgttctttagaagaagga
tttaataaagctggattacactataaacttgttggtggaatgaagttttacgaaagaagt
gaaattaaagatttaattgcatactttagaatcttaacaaatttaaatgataatttttct
ataaaaagaatcataaataaaccaaaaagaggtattggaaaaactacaattgaaaaactt
gaagaaaaatctattgaaactggtaaatctatttttgatttgattcaagaacttgatgct
gaaggtattagtttaattgttggtaaaaaaaatgcaagaacactaaaagtatttgaagcc
tctattttagatttaagagaatctttaactcaatcaaaaatgagatttttagataacttt
gaggagacttttgattatagagcatcttatgataatcttcctgatggttttgaaagacaa
gctaatattgatgagttctatggatatataagagattattttattcaaaatcctcattta
gatttaaaagattttttaaatgaaatcgcacttgaaagtgaaaatgatgattatagtggt
gaagctgtctcaatgatgagtgtacacgcatcaaaaggtctagagtttaaaaatctattt
attattggtttagaagaaggttttttcccaattactggtgatggaagtgatttagaagaa
gaaagaagattaggttatgttgcaattacaagagctaaagataatcttactttatctttt
gttcattcaagattttataaaggaaaaagaacagttctttcaaaaagtagattcttaagt
gaatctggacttataaaaggaagtttaactattcaaaaacaagcagattttaaaaaaggt
gatattgtttctcacaaaatttttggaatgggaagagtagaaaaagtaacgagtgcgggt
aaagattacaaattgactattaattttggtggaacaaaaagagatatattatcttcattt
gtggaaaaagcataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (68)   

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