KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT188596
Entry
AGABI2DRAFT188596 CDS       T03140                                 
Symbol
AGABI2DRAFT_188596
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03013  Nucleocytoplasmic transport
abv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AGABI2DRAFT188596 (AGABI2DRAFT_188596)
  09122 Translation
   03013 Nucleocytoplasmic transport
    AGABI2DRAFT188596 (AGABI2DRAFT_188596)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abv03019]
    AGABI2DRAFT188596 (AGABI2DRAFT_188596)
   03041 Spliceosome [BR:abv03041]
    AGABI2DRAFT188596 (AGABI2DRAFT_188596)
Messenger RNA biogenesis [BR:abv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     AGABI2DRAFT188596 (AGABI2DRAFT_188596)
Spliceosome [BR:abv03041]
 Complex C
  Other components
   EJC/TREX
    AGABI2DRAFT188596 (AGABI2DRAFT_188596)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    AGABI2DRAFT188596 (AGABI2DRAFT_188596)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A
Other DBs
NCBI-GeneID: 18080946
NCBI-ProteinID: XP_006456769
JGI: Agabi_varbisH97_2_188596
Position
Unknown
AA seq 352 aa
MASAQDDEPIPQRQPSPPPHTTFAARGIHPPNFSAFKPKDYRHPTTQPITHVAWNCDGRK
LAGVGVDKTARVWNPDKSLEYRSAQAYSGGHSDDVDYVSWNPTHPELFCTSGQRDRRIVF
WDARQSRFTQQCVLKVAPSYTQYAPDGRSILYVTAGQQLMFLSYGKETEEAKEQWHPKIL
PNQKESVGSKAIFNHTGDGVVVAFHSEHTLRVLDYPSLDVRDSPAAHVGGCMALALDPRG
RYLASGGLDSIVNLFDVRDWIVSRTITACENNVNDLSFSHDGEFLAIASTGSYIDICAVE
TGLSMHRISALAPSPTVSWHPSKYALAYCGQIKAREGGPPPAAVISMFGLIE
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggcttctgcccaggacgacgagcccattccgcaaaggcagccatcccctccacctcat
acaacattcgccgcccgtggtattcatcctccgaatttctctgctttcaagccaaaagat
taccgccacccgacgacacaaccgatcacacatgtagcttggaattgcgatggacgcaaa
ctcgctggtgttggagttgataaaacggcaagggtttggaacccggataaatctctcgag
tatagatctgctcaggcctattcaggcggacactctgacgacgttgactatgtatcgtgg
aatccaactcatccggaactgttttgcacgtcaggtcaaagagaccgccgtatcgtattc
tgggatgcaagacaaagtcgttttacccaacaatgtgttctgaaagtagcgccgtcctat
actcaatatgctccagacggacgttctattttgtatgtcactgcgggtcaacaactcatg
tttttgtcctacggtaaagagacagaagaggccaaagaacaatggcacccaaaaatacta
cctaatcaaaaagaatctgttggatccaaggctatcttcaatcacacaggagacggagta
gttgtggcatttcactctgaacatacacttcgagtgctggattatccgagtttggatgta
agagattctccagcagctcatgtcggtggatgtatggcattagctttagatccaaggggt
cgttatctcgcttctgggggcttagactctatcgtgaacttgtttgacgtgagagattgg
atagtttccaggacaatcacagcctgcgagaacaacgttaacgatctgagcttctctcac
gatggtgaatttctagctatcgctagcacaggatcctacatcgatatctgtgctgttgag
actggtttgtctatgcaccgcatttcagcgttggcaccttctccgactgtatcctggcat
ccatcaaaatatgccctcgcatattgtggtcaaatcaaagctcgtgaaggcggtccacct
cctgctgctgttataagcatgttcggactcatagaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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