KEGG   Malaciobacter canalis: ACAN_1470
Entry
ACAN_1470         CDS       T06502                                 
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
acaa  Malaciobacter canalis
Pathway
acaa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acaa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACAN_1470 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acaa03019]
    ACAN_1470 (pnp)
   03016 Transfer RNA biogenesis [BR:acaa03016]
    ACAN_1470 (pnp)
Enzymes [BR:acaa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     ACAN_1470 (pnp)
Messenger RNA biogenesis [BR:acaa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ACAN_1470 (pnp)
Transfer RNA biogenesis [BR:acaa03016]
 Prokaryotic type
  tRNA degradation factors
   ACAN_1470 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 DUF6267 S1_2 CTD9 KH_2
Other DBs
NCBI-ProteinID: QEE32946
Position
complement(1467743..1469923)
AA seq 726 aa
MSTVCEFELNGKDEIFEFNKVAKQANGSVLARLGNAVVLATVVSEFDNPVEEDFTPLTVQ
YVEKTYAAAKLPGGFIKREAKPSEFETLTSRVIDRSLRPLFPKGYVYPTTITVMVLSADR
DVDLQALALNAASAALYTSNLPIKKSIAGVRIGKINNEYIVNPTADQMQESTLDLYVAGS
KDELLMIEMKSISSEEMVEVDIEAFTKIHKTNEVNEDDLVEAIEVAQNVLKEVNTTYENG
FETVCKEQKSVELVEFTIDEAIINNVRTNYNANVKDAIKKLAKSERAVELKELAKYILEK
EYKENEDINLAQVYEAVSIVKKEIVRKMIVEDKVRADGRGLKDVRPISIETNILPSTHSS
CLFTRGETQALVVGTIAGPKDGQMYEVLTDKSTSMENFMVHYNFPGFSVGEAKPMFGVGR
RELGHGNLGKKALEATIDKDFNETIRLVSEILESNGSSSMATVCGGSLALKAAGIPISGL
VAGVAMGMVVEDNNYSVLTDIMGLEDHDGDMDFKVAGTSEGITALQMDIKLGGIELSVLK
EALLQAKEGRLHILNLMEEAAKEIVPSDALPLVEQFAIDPGKIMVVIGKAGSTIKEIIEK
FSVSIDLDRDSGNVKVSGEHKQNVLDACEHIKTISNNATSRKESGKNIDFGKLYTPEEVL
EGKVERITDFGAFISLPKGGEGLLHISKISKERVKNVSDVLSVGEEVKIKVLNVKKDRIE
LASTLL
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgtcaacagtgtgtgagtttgaattaaatggaaaagatgaaatatttgaatttaataaa
gtagcaaaacaagctaatggatcagtattagcaagattaggaaatgcagttgtattagca
acagtagtaagtgaatttgataatccagtagaagaggattttacaccattaactgttcag
tatgtagaaaaaacatatgctgctgctaagcttccaggcggatttataaaaagagaagca
aaaccaagtgaatttgaaactttaacttcacgagtaattgatagaagtttaagaccactt
ttcccaaaaggatatgtatatcctacaacaattactgttatggttctaagtgcagataga
gatgttgatttacaagcattggctttaaatgcagctagtgcagctttatatacttcaaac
ttacctattaaaaaatctattgcaggtgtaagaattggaaaaatcaataatgaatatatt
gttaatcctactgctgatcaaatgcaagaatctacactagatttatatgtagctggttct
aaagatgaattactaatgattgaaatgaaatcaatttcaagtgaagagatggttgaagtt
gatattgaagctttcacaaaaattcataaaactaatgaagtaaatgaagatgatcttgta
gaagcaatagaagttgcacaaaatgtattaaaagaagttaatacaacttatgaaaatgga
tttgaaactgtttgtaaagaacaaaaaagtgttgaacttgttgagtttactattgatgag
gcaattatcaataatgtaagaactaactataatgcaaatgtaaaagatgctattaaaaaa
cttgcaaaaagtgaaagagcagtagaattaaaagagcttgcaaaatatatcttggaaaaa
gagtataaagaaaatgaagatataaatcttgctcaagtttatgaagcagtttcaattgta
aaaaaagagattgtaagaaaaatgatcgttgaagataaagtaagagctgatggaagaggg
cttaaagacgtaagacctatttctatagagactaatatacttccttcaactcactcttct
tgcttatttacaagaggtgaaactcaagctttagtagtaggaacaatcgcagggccaaaa
gatggacaaatgtatgaagttttaacagataaatctacatctatggaaaattttatggta
cattataattttccaggtttttcagttggcgaagcaaaacctatgtttggagtaggtaga
agagaattaggtcatggaaatcttggtaaaaaagccttagaagctacaattgataaagat
tttaatgaaacaattagattagtatctgaaatacttgaatcaaatggttcttcttctatg
gctacagtttgtggtggttctttagcacttaaagcagcaggtatcccaatctctggttta
gttgctggtgttgcaatgggaatggtagtagaagataataactattcagttttaactgat
attatgggtcttgaagatcatgatggagatatggattttaaagttgcaggtacaagtgaa
ggtattacagcacttcaaatggatattaaattaggtggaatagaacttagtgtattaaaa
gaagcattacttcaagcaaaagagggaagattacatattttaaatcttatggaagaggct
gcaaaagaaatagttccaagtgatgctttaccattagttgaacaatttgcaattgatcca
ggtaaaataatggttgtaattggtaaagctggttcaactataaaagaaataattgaaaaa
ttctctgtttcaattgacttagatagagatagtggaaatgtaaaagtaagtggagaacac
aaacagaatgtacttgatgcttgtgagcatataaaaacaatttcaaataatgcaacttct
agaaaagaaagtggcaaaaatattgattttggtaagctttatacaccagaagaagtatta
gaaggtaaagttgaaagaataacagactttggtgcatttatatctttaccaaaaggcgga
gaaggtctactacatatatcaaagatctcaaaagagagagttaaaaatgtttcagatgta
ttaagcgtaggagaagaagtaaaaattaaagtattaaatgtgaagaaagatagaatagaa
ttagcttcaacactattgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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