KEGG   Acinetobacter calcoaceticus: BUM88_12950
Entry
BUM88_12950       CDS       T05452                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
acal  Acinetobacter calcoaceticus
Pathway
acal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BUM88_12950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acal03019]
    BUM88_12950
Enzymes [BR:acal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BUM88_12950
Messenger RNA biogenesis [BR:acal03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BUM88_12950
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: AQZ82442
Position
complement(2667674..2668843)
AA seq 389 aa
MLEHVFMTSGFETLNLHPQLKKAIDALGFKQMTPIQQKVLKYTLGGHDAIGRAQTGTGKT
AAFLISVINDLLHNPIQEQRFRGEPRALILAPTRELALQIESDAKLLTKFSDLHVVTLLG
GVDFDKQKKQLDANFVDIMVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSV
KRIVRYSPRKEERQTLMFSATFSYDVLNLARQWLFEPITVEIEPEQKTNNDVEQRVYVVA
KQDKYRLLQDILREEPIDKVMIFANRRDQVRRLYDHLKRDGYRVGMLSGEIAQDKRLKML
DQFKQGKNNIMIATDVAGRGIHVDGVSHVVNYTLPEQSDDYVHRIGRTGRAGSQGVSISF
LSEDDAFYLPEIEKAIGKKLPLTRIEGYC
NT seq 1170 nt   +upstreamnt  +downstreamnt
ttgttagagcacgtatttatgacatctggttttgaaaccttgaatttacatccgcaactt
aaaaaggcgattgatgctttagggtttaagcaaatgaccccgattcagcaaaaggtttta
aaatatacgttgggcgggcatgatgcaattggtagagcacaaacaggaacaggtaaaact
gctgctttcctgattagtgtaattaatgacttgttacataacccgattcaagagcagcgc
tttcgtggtgagccacgtgccttgattttggcgcctactcgtgaattggcattgcaaatt
gaaagcgatgcgaagttactcacaaaattttcagatttacacgtcgtgacactattaggt
ggcgtagattttgataagcaaaagaaacagctagatgctaattttgtcgatatcatggtt
gccacgcctgggcgtctaattgattttgtagaacaaaaagaagtttggctcgatcaaatt
gaattcctggtcattgatgaagcagaccgcttattggacatgggttttattccttctgta
aaacgtatcgtgcgttattccccgcgtaaggaagaacgtcaaaccctcatgttctcggct
acttttagttatgacgtgcttaatttggcgagacaatggttgtttgagccaatcactgtt
gaaattgagcctgagcaaaaaaccaataacgatgttgagcaacgtgtttatgtagtggct
aaacaagataaatatcgtttgctacaagatattttgcgtgaagagcctatcgataaagtc
atgatttttgctaatcgacgtgatcaagttcgccgtctttatgatcatttaaagagagat
ggatatcgggtcgggatgctttcaggtgaaattgctcaagataaacgtttaaaaatgtta
gaccagtttaagcagggtaaaaataacatcatgatcgcaactgatgttgctggccgtggt
attcatgttgatggcgtatctcatgtggttaactataccttacctgagcagtcagacgat
tatgtgcaccgtattggtcgtacaggccgtgccgggtcacaaggtgtaagtattagtttt
ctttcagaagatgatgctttttacttgccagaaattgaaaaagcaattggtaagaaattg
ccattaacccgtatagagggttattgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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