KEGG T02667: ACA1

Acanthamoeba castellanii: ACA1_198540

Entry

ACA1_198540       CDS       T02667

Name

(RefSeq) RecF/RecN/SMC domain containing protein

K22804

structural maintenance of chromosomes protein 6

Organism

acan Acanthamoeba castellanii

Brite

KEGG Orthology (KO) [BR:acan00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acan03400]
    ACA1_198540
DNA repair and recombination proteins [BR:acan03400]
Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     ACA1_198540

SSDB

Motif

Pfam:

SMC_N AAA_23 AAA_15 SMC_hinge AAA_21 DUF16 Fusion_gly AAA_29 ATG17_like KASH_CCD DUF1664 SbcC_Walker_B ABC_tran HMMR_N

Other DBs

NCBI-GeneID:

14920457

NCBI-ProteinID:

XP_004341725

UniProt:

L8H4I8

Position

Unknown

AA seq 1043 aa
MQQTEAEVGIIEMIKLENFMCHRHLELKLGPNINFIIGQNGSGKSAVLVALTVCLGAKAG
FTNRGKKITNFIRGDASSASVSVTLRNRGAEAYKPDLYGKTITIIRTIARSGSSGYKVKS
DSGKTIATTRREVLMVMEQFNIQIENPCVILMQDTSRAFLNASKPAEKYKFFLSATQLQQ
ISDDYRTVDVKLNGMKQTLENKQDVLPDLKKRVQELEHQFREVAKLRDLESQVRKMKGHL
IWAQLQGREKELAELREKVEARQREIDKNDQVLDKIKNATQKLTEKYEARQKLVDETGAQ
IRAATAEVETYRTQIGEIKRGMSHHQNTVKDLRKRRDELALRIRKLQEFISDVQEKAMRD
TQAEKLERQERIAALQAALQAQHEKAEAMDQELAEHERQRQSIDAELKDLTAKEREVVQE
AQKLEGQIRTLELQKADRTRCFGRNMPALLDAINRERRWQKKPIGPLGLCLTIKDDQWAT
AIETALGRTMDAFVVDNHHDEKILKEIGRRVGQVPDMYVQRFQDRVYHIPDNALPPPHLT
TVLSQLQADEVMVYNCLIDQRQIDNIILIPDRQQASQIMFRQRPPNAREGYLPDGSRLLV
RGGAEVFNAGNTRARRLGRNFEEQIRDAHVALEHKQKEAAHFRPRVQELRSAADALRKQR
AALKRDEGRLTADIHELQSVREEAPPDISEAQTSLEGFLKTKEELEAELAKAMEVAGQVP
EELGPLQDKFAEKKAEIENLAARSEQIAAKLTSVHKNITTIAAREKQMVLNKEKLMQSKL
EEETSLAEQRAALDEEMRRAEQAVPRPEEDLPPPAHLQREIQKMEARIRSQTDGQRSPAE
ITREFKAAKKAYDEATFKVQLLSSLLELLENDLRDRLNKWLLFRRSIANRTTFHFHGFLS
RKGYAGSLSFDHQHRHLDIEVQLDAAQGGPQGARDTRTLSGGERSFSTVALLLSLWEAME
SPFRAMDEFDVFMDAVNRHLSLKLLIESARQQRHRQFIFITPHDLTSVASGPDVRVNRMR
DPERADIVGIGAQQTILDQYTQS

NT seq 3132 nt +upstreamnt +downstreamnt
atgcagcaaacggaagccgaggtgggcattattgaaatgatcaagctcgagaacttcatg
tgccatcgtcacctggagctgaagctgggacccaacatcaacttcatcattggccaaaat
ggaagcggtaagagcgccgtgctggtcgcactcactgtgtgcttgggagcaaaggctggc
ttcaccaatcgtggaaagaagattaccaacttcatccgtggagacgccagctcggcctct
gtatctgtgacgctgcgcaatcgtggcgcggaggcctacaagcccgacctctacggcaag
accatcaccatcattaggaccatcgcacggtccggctcgtcgggctacaaagtcaagagt
gacagcggcaagacgatcgcgacaacgaggcgtgaggtgctgatggtgatggagcagttc
aacatacagatcgagaacccctgtgtgatcctcatgcaggacaccagcagggcgttcttg
aacgcgagtaagcccgccgagaagtacaagttcttcctgagcgccacccagctccagcag
atcagtgacgactaccgcacagtcgacgtcaagctgaacggtatgaagcaaacgctggag
aataagcaagacgtactgcccgacctgaagaagagggtccaggagctggagcatcagttc
agggaagtggccaagctgcgcgacctcgaaagccaggtccgcaaaatgaagggccacctg
atttgggcgcagcttcaaggccgagaaaaagagctggccgagttgcgcgagaaggtcgag
gcccgccagcgcgagatcgacaagaacgaccaggtcctggacaagatcaagaacgcgacg
caaaagctcacggagaagtacgaggcccggcagaagctggtggacgaaaccggcgcgcag
atccgtgcggccaccgcggaggtcgagacctaccgcacccagatcggcgagatcaagcgc
ggcatgagccaccaccagaacacggtcaaggacctgcggaagaggcgcgacgagctggcg
ctgcgtatcaggaagctgcaggaattcatcagcgacgtgcaggagaaggccatgcgcgac
acacaagcggagaagctggagaggcaggagaggatcgcggcgctgcaggcggcgttgcag
gcgcagcacgagaaggccgaggcgatggaccaggagctcgccgaacacgagcgccagcgc
cagagcatcgacgccgaactgaaggacctcaccgccaaggagcgcgaggtcgttcaggag
gcacaaaaactcgagggccagatccgcacgctggagctgcagaaggcggaccgcacgcgc
tgcttcggccgaaacatgcccgccctgctcgacgccatcaacagggagcgtcggtggcaa
aagaagcccatcggcccgctgggcctttgcctgacgatcaaggacgaccaatgggcgacg
gccatcgaaaccgcgctcggtcgtaccatggacgcctttgtcgtcgacaaccaccacgac
gagaagatcctcaaggagatcggacggcgcgtggggcaggtgccggacatgtatgtgcag
cggttccaagaccgggtctaccacataccggacaatgcgctgcctccgccccacctcacc
accgtcctctctcagctccaggccgacgaagtcatggtgtacaactgcctgatcgatcag
cggcagatcgataacatcattctcatcccggatcgacagcaggcctcacagatcatgttc
cgacaacggccgccgaacgcgagagagggctacttgccggacggctcgcgactgctggtg
cgcggcggcgctgaagtgttcaacgccggaaacacgcgcgcgcggaggctcggccgcaat
ttcgaggagcagatccgggacgcccacgttgcgctcgagcacaagcagaaggaggccgcg
cacttcaggccgcgcgtgcaggagctgcgaagcgctgccgatgccctccgtaagcaacgg
gcggcgctcaagcgggacgagggtcggctcacggccgacatccacgagctccaatcggtg
cgagaggaggccccgcccgacatctccgaagctcagaccagtctcgagggttttctgaag
acgaaggaggagctcgaggccgagctggccaaggccatggaggtggccggccaggtgccg
gaggagctggggccgttgcaggacaagttcgccgagaagaaggccgagatcgagaacctg
gccgcccgcagcgaacagatcgccgccaagctcacgagcgtgcacaagaacatcaccacc
atagcggcgagggagaagcagatggtgctcaacaaggagaagctgatgcagtccaagctg
gaggaggagacgtcgctggcggagcagcgcgccgcgctggacgaggaaatgcgccgggcc
gagcaggccgtcccgcggcccgaggaggacctgccgccgccggcccacctccagcgcgag
atccagaaaatggaggcccgcatccgctcgcagacggacggccaacggagtccggcggag
atcacgcgcgagttcaaggcggccaagaaggcgtacgacgaggccacgttcaaggtgcag
ctgttgagcagcctgctcgaactcctcgaaaacgacctcagggatcgtctgaacaagtgg
ctcctgttccgtcgctccatcgccaaccggacgaccttccacttccacggattcctgagc
cgcaagggctacgccgggtcgctctcgttcgaccaccagcaccgccacctggacatcgaa
gtgcagctcgacgctgctcagggcggtccgcagggcgcacgcgacacgcgaaccctctcc
ggcggcgaacgctccttctccaccgtcgctctcctgctctccctgtgggaagcgatggag
tcgcccttccgtgcgatggacgagttcgacgtgttcatggacgcagtgaaccgccacctg
tcgctcaagctgctgatcgagtcggcccgacagcagaggcaccgccagttcatcttcatc
acgccacacgacctcacctccgtcgcgtcgggacccgacgtgcgggtgaaccgcatgcgc
gaccccgagcgagccgacatcgtcggcatcggcgctcagcagaccatcctcgaccagtac
acccagtcttga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (106)   
   KEGG ORTHOLOGY (1)   
   RefGene (102)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (126)   

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