KEGG   Aeromonas caviae: VI35_18150
Entry
VI35_18150        CDS       T05190                                 
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
acav  Aeromonas caviae
Brite
KEGG Orthology (KO) [BR:acav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:acav03009]
    VI35_18150
Enzymes [BR:acav01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     VI35_18150
Ribosome biogenesis [BR:acav03009]
 Prokaryotic type
  rRNA helicases
   VI35_18150
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22
Other DBs
NCBI-ProteinID: ATP91753
UniProt: A0A3N6WFX1
Position
complement(3930880..3932100)
AA seq 406 aa
MSQSFDDFDLNPALSRALAEMGFTRPTTIQQMVLEPALDGRDILASAPTGTGKTAAFLLP
AMQHLLDFPRRKPGPCRMLILTPTRELALQVSAHAKALAVHTHLSIETIIGGVSHEEQLP
ALTKTTDIVVATPGRLLEYIEKEEFESHDIEVLVLDEADRMLDMGFIKDVNRIVEEARYR
KHTMLFSATLEGAGLEKFASEILKDPVELHAEPPRSERRPITQWIHLADDAAHKLALLVH
ILKNPETQKAIIFVKTRERLAELSGQLQAAGVPCAWIRGEMEQAKRIESIRKFHEGEVPF
LIATDVAARGIDLPNVSHVINYDMPYGADVYVHRIGRTGRAGNRGCAISLVEAHDMAMVA
KIERYTEERLKRRVIDELRPRHKEARVPVKKKKPKDAKKSAKKKKK
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgagccagtcctttgatgatttcgacctgaatccagccctcagtcgggccttggccgag
atgggattcacccgccccaccaccatccagcagatggtgctggagccagccctggacggc
cgcgatattctggcttctgcgccgaccggaaccggcaagaccgccgccttcctgctgccc
gcgatgcagcacctgctggacttcccgcgtcgcaagccgggtccgtgccgcatgctgatc
ctgactccgacccgcgagctcgcgctgcaggtgagtgctcacgccaaggccctggcggtg
cacacccatctcagcatcgagaccatcatcggtggcgtcagccatgaagagcagctgcct
gccctgaccaagaccaccgacatcgtggtggccaccccgggccgtctgctcgagtacatc
gagaaagaggagttcgagagccatgacatcgaggtgctggtgctggatgaagcggaccgg
atgctggacatgggcttcatcaaggacgtgaaccgcatcgtggaagaggcgcgctaccgc
aagcacaccatgctcttctccgccaccctggaaggggccggcctcgagaagtttgcgagc
gagatcctcaaagacccggttgagctgcacgccgagccgccccgcagcgagcgccgcccc
atcacccagtggatccacctggccgatgatgctgcccacaagctggctctgctggtgcac
atcctgaaaaacccggaaacccagaaggccatcatcttcgtcaagacccgtgagcgactg
gcggagctttccggccagttgcaggcggcaggcgtgccctgcgcctggatccgtggcgag
atggagcaggccaagcgcatcgagtctatccgcaagttccacgaaggggaggtgcccttc
ctcatcgccaccgacgtggccgcccgcggtatcgacctgccgaacgtcagccatgtcatc
aactacgacatgccctacggcgcggatgtctatgtgcaccgcatcggtcgtaccggtcgt
gccggcaaccgtggctgcgccatcagcctggtggaagctcacgacatggccatggtcgcc
aagatcgaacgctacaccgaggagcgcctcaagcgccgggtgatcgatgagctgcgcccc
agacacaaggaagcgcgggtgccggtgaagaagaaaaagccgaaggatgccaagaagtcg
gcaaagaagaaaaagaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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