KEGG   Anolis carolinensis (green anole): 100552207
Entry
100552207         CDS       T01608                                 
Symbol
ddx60
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
  KO
K20103  ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
Organism
acs  Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:acs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acs03019]
    100552207 (ddx60)
Enzymes [BR:acs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100552207 (ddx60)
Messenger RNA biogenesis [BR:acs03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     100552207 (ddx60)
SSDB
Motif
Pfam: DEAD ResIII Helicase_C
Other DBs
NCBI-GeneID: 100552207
NCBI-ProteinID: XP_003223762
Ensembl: ENSACAG00000016010
UniProt: H9GMW7
Position
Un
AA seq 1748 aa
MASEQSLKQGEASSKPIMLKKKKKKEEVPARKDGNEPCSLDFKTTDLQKCMEEITDFICN
DEIPKAEYVSLLNDYVESEFFLIDGDSLFITCASDTTLQPGQNLHFFYLVERFLLDLTSK
GAKFVIVFFKDAEYLYFQNPDLSSLRRALIMHLKNNTEIPIHTEFPNCLEDSWQSFLEEN
YPYFLIISDEGLDEMQTNFFHLFIIQTLSNKVNVVLTLGQESDVIRVYGYHIHSAYRHQI
FFWKRKATVKHYYKTLIENLKECRAKVCLSLSGCSNMDVLAAKVHEKFSQFKKDMEDLRY
IICIITCSMVLEMRTQKYMNTTLTLQETEDLTRMYCLSVVFLHHLPLEQRARIRHIDDCW
KKEVLRFIQQHKLCEFLVLGHLTTQTSWKMDFSTLPDLSDTLLWKNIAFYYEAENVAGFD
LNLGTIISKDYELLWRHITALSESHDIGSSFPLKISSCCFLEKKSSPSKKGITSLLKPGL
IPMENSIVNKFAGDILIDLSFLKSDDPVVTSLKKQKDFDELRHWHSGKLLSDDYDRTHAD
EAAPKDPWVLRNQQKRQSFMQFYGQSLEEGNLSKTIVAQVDPPKKAYADPKKSKTVQKTK
AEVIIEENKKRRKTEEEKKEERQWATLSVSIQTKIKENMTSGIKYLEDFLKKCQSTSVKC
SAELAAMNVCFSVWTENSRTEGKIGDLNIAVELMRRIHSLIVNYDHLNLLKETEFQQIGQ
CLLTLGFDNLATSLKFIKVSEDKKKELKRKSSKYALGMGSSRFQLQYMSHFLIRDERKDP
DPRVQHFIPDTWQRELLDIVDNNESAVIVAPTSSGKTYASYYCMEKILRDGNEGVIVYVA
PTKALVNQVSATIYNRFNKVLPGGLAICGVFTRDFRYDVLNSQILVTVPQCLEILLLSPR
RQEWAKKIRYVIFDEVHCLGGEIGAEVWEHLLVMIRCPFLALSATISNPKHLAEWLQSVK
VYWRNTETELAKSSSSLLGGAKGKKSARVQNISYKVKLVIHGERYNDLEKHVCSFNRGEF
TIHHYHPCAALTVDHLERYGFPLDLSLSPRETVILYDTMVKSRKSWPKANELDPEVFFKD
QIVITKTDARRYETKLKEELEMWITNGNKNKAKAVLALLKPQLTTSSETDMKTHFPHFVE
KLNQMNKLPALFFLFDVKGVEKLAEEVCTFLERKQSLKRSGQHTEGKPSSKKDSHADKQS
SRSKNIKKMEKRAKKIEKATQKFPSDDTKFTHKDEKCFVLEAELDNITKHLDKLSEIPPD
CTYANWQTVDNEFLEKVFHRARFVRNNQALKKLVLRGIGYHHTSVEKKARQVVEMLFRKG
FIQVVTATGTLALGINMPCKSVVFVQDSVYLDALNYRQMSGRAGRRGQDLLGNIYFLDIP
MPKIQKLIKSNVPELRGQFPLSISLILRLMLLASKADDKKDAEAKVLSILKHSLLSFKQP
RALEMLKLYFLFSLQFLVKEGYVDRKGNTTGFSGLVTHLHYHEPSNIVLVEFLVKGLFHK
LCEPSKIKRSNVFSSDVMETLVLVLAHLFGRRFLPAVNSGRKFYQSKVFLKDLPKDFADA
LHEYNCKIEENFRQFLKIVSSLADMKQEYKLPLSKFDFSSKKQPDSPLASHLMSCDEGRT
AVSPFVCLSGNTEIDLFHAETVDSVILHTIGIKAANIPVFCSKKYDRKGRIMPQNAYILD
FYKHGSLVAMEQDNGIHEGEAYYLLKDFSLALQAISVSLRELCDNEVDNVVLAFEQLTTD
YWSKLEKV
NT seq 5247 nt   +upstreamnt  +downstreamnt
atggcttctgaacaaagcctaaaacaaggagaagcttcttcaaaacccatcatgctaaaa
aagaagaaaaagaaagaggaagtacctgcaagaaaagatggaaatgaaccatgctcactt
gattttaaaacaacagatctacaaaaatgcatggaagaaattactgattttatttgtaat
gatgaaataccaaaagctgaatatgtcagcttgctaaatgattatgttgagtcagagttt
tttctgattgatggtgattcgttgttcatcacttgtgcgagtgacacaacattacaacca
ggacaaaacttacacttcttttacttagtcgaacgctttctcctggatttaacaagcaaa
ggggcaaaatttgtcattgttttcttcaaggatgcagaatatctgtatttccaaaatcct
gatcttagttctctgcgcagagcattgatcatgcatctaaagaacaacactgaaatacca
atacatactgaatttcctaactgcttagaagacagctggcagagttttctggaagagaat
tatccttatttcttaataatttcggatgaagggttggatgaaatgcagaccaattttttt
cacttattcatcatccaaactttgtcaaacaaagtcaatgttgtgcttactttaggtcaa
gaatcagatgttatcagagtttatggataccatatccacagtgcataccgtcaccagatt
tttttctggaagcgaaaagcgacagtaaagcattactataaaacactgattgagaacttg
aaagaatgtagagcaaaagtatgcctttctcttagtggttgttcaaatatggatgttttg
gcagcaaaggttcatgaaaaattcagccaattcaagaaagatatggaagatcttcgatat
atcatctgtattatcacttgttcaatggtcctggaaatgcgtactcagaaatatatgaac
acaacattaacactgcaagaaactgaagacctaaccaggatgtattgcctcagtgtggtt
tttctacaccatctgccccttgagcagcgagctcgaattagacacattgatgactgctgg
aagaaggaagttttaagatttatacagcagcataaactgtgtgaatttcttgttctggga
catcttaccacgcagacctcatggaaaatggatttttctacattgcctgatttaagcgat
actcttttgtggaagaatattgcattttattatgaagcagaaaatgttgcaggatttgat
ttaaatttaggaacaataattagtaaggactatgaacttctgtggagacatattacagca
ttatctgaatcgcatgatattggatcatcatttccattgaagataagttcatgctgtttt
cttgaaaagaaatcttcacctagcaagaaaggtatcacatcacttctcaaaccaggactt
ataccaatggaaaattcaatagtgaataaatttgctggggatattttaattgatttgtca
tttttgaaaagtgatgatcctgtggttacctcactgaaaaaacagaaagattttgatgaa
cttcggcactggcattcaggaaaactccttagtgatgattatgacagaacacatgcagat
gaagcagcacccaaggatccatgggtcctacggaatcaacagaaacgacaaagttttatg
caattttatgggcaatccctagaagaaggtaacctgtcaaaaacaattgttgctcaagtg
gatcctccaaaaaaggcttacgctgatcccaaaaaaagcaagacagttcaaaagacgaaa
gcagaagttattattgaggagaacaaaaaaagaaggaaaactgaagaagagaaaaaagag
gaacgtcaatgggctactctttcagtgtcaatccaaacaaaaatcaaagagaatatgacc
tctggaataaagtatctagaagattttctgaaaaaatgtcagagtacatctgtgaaatgt
agtgctgaattggctgcaatgaatgtttgcttcagtgtatggacagaaaacagcaggact
gaaggcaaaattggtgacttaaatattgcagttgaattgatgagaaggatccattcattg
attgtaaattatgaccacctcaatttattgaaagagactgaattccaacagattggtcaa
tgtctcctgacccttggatttgacaacctggcaacatctttaaaatttatcaaggtttca
gaagataaaaagaaagaacttaaaaggaagtcttcaaagtatgctcttggcatgggatct
tcccgttttcagctgcagtatatgagccattttcttatacgggatgaaagaaaagaccct
gatcccagagttcaacattttattcctgatacatggcagagggaacttcttgacattgtg
gataataatgagtctgcagtaattgttgctcctacatcatcaggcaaaacatatgcttct
tactattgtatggagaaaatcctgagagatggtaatgaaggtgtgattgtatatgttgca
cccacaaaggctcttgtaaatcaagtgagtgcgactatttataatcgatttaataaagta
ctgcctggtggtcttgcaatatgtggcgtttttacacgagattttcgctatgatgttttg
aattctcagatactggtaacagtgcctcagtgtttagaaatcttactgctctcacctcgt
cgccaagagtgggccaaaaaaataagatatgttatatttgatgaggtacactgtcttgga
ggtgaaattggggcagaagtttgggagcatcttctggttatgattcgatgcccatttttg
gccctctctgcaactataagcaaccccaagcatcttgccgagtggctgcagtcagtaaaa
gtatactggcgaaatactgaaactgaactagcaaagtctagttcttccttacttggaggg
gccaaaggaaagaaaagtgccagagtacaaaatatctcatacaaggttaaattagtgata
catggagaaagatacaatgacttagaaaaacatgtatgctccttcaatcgtggtgagttt
acaatccatcactatcatccctgcgctgcactgactgtggatcatcttgagagatatggt
tttccactggatctttctttatctcctcgagaaactgtgatattgtatgatactatggta
aaatctaggaaaagttggccaaaggcaaatgaactggatcctgaagtattttttaaggac
caaattgtaatcaccaaaactgatgcaagacgttatgaaacaaaattgaaagaagaattg
gaaatgtggattacaaatggcaataaaaataaggcaaaagcagttctggcactccttaag
cctcagcttaccacttcttctgaaacagacatgaaaacacactttcctcattttgttgaa
aaactcaatcagatgaataaattacctgcattgtttttcttatttgacgtcaaaggagtg
gaaaaattggctgaggaagtctgcactttcttagagaggaagcaaagccttaaaagaagt
ggacaacacacagaaggaaaacccagttccaaaaaggacagtcatgcagataagcagagc
tcacgttcaaagaatattaaaaaaatggaaaaaagggcaaaaaagattgaaaaagctaca
cagaaatttccatctgacgataccaaatttacccataaagacgagaaatgttttgttttg
gaagctgaacttgacaatataacaaagcacctggataaactttctgaaatccctcctgat
tgcacatatgcaaattggcaaactgttgataatgagtttttggaaaaagtctttcatcgg
gcaagattcgtgagaaataaccaagcactgaaaaaactagtactaagaggcattggttat
caccatacttctgtggaaaagaaagcgaggcaggtggtggagatgcttttcaggaaagga
tttatccaggtggtgacagctacgggaaccttggccttgggaatcaacatgccatgcaaa
tctgttgtttttgtacaagattctgtctatttagatgctctgaactacaggcagatgtct
ggacgggctgggcgacgtggccaagatttgttgggaaatatctattttttagacattcct
atgcccaaaatacagaaactcataaaatcaaatgttcctgagcttcgaggacagtttcct
ttgagcatttctctaatattgagactcatgctattggcttcaaaggcggatgacaagaag
gatgcagaagcaaaggttttatctatattgaagcattcacttttatccttcaagcaaccc
agggctctggaaatgttgaaactctatttcttgttttccttacaatttcttgtgaaggag
ggatatgtggatcgcaaaggtaatacaactggattttctggacttgtaactcatctgcat
taccatgaaccttccaatattgttctagttgaatttctcgtgaaaggtttgttccacaag
ctgtgtgaacccagcaagataaaacgatcaaacgttttctctagtgatgtgatggaaaca
ttggtgctagtattggcacatctttttggaagaagatttcttcctgctgtcaattctgga
aggaagttttatcagtcaaaggtgtttcttaaagatctcccaaaagattttgctgatgct
ttgcatgaatacaattgcaaaattgaagagaattttagacaatttttgaagatagtgtca
tctttggctgatatgaagcaagaatacaaactgccactttcaaaatttgatttttcaagt
aagaagcaacctgactctccgcttgcatctcacttaatgagttgtgatgagggaaggaca
gcagtttcaccatttgtgtgcctttcaggaaatacagaaattgatttgttccatgcagag
acggttgacagtgtcattttgcacacaatcggcattaaagctgccaacattcctgttttc
tgttctaagaaatatgataggaagggaagaattatgccacagaatgcctatatccttgat
ttttacaaacatggatctttggtagcaatggaacaggacaacggtatacatgaaggagaa
gcttattatttgctgaaggacttttctcttgctcttcaagcaatcagtgtttctttgcgt
gaactttgtgacaatgaagttgataatgttgttctggcatttgagcaattaaccacagac
tactggagtaaactggaaaaggtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (62)   

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