KEGG   Abiotrophia defectiva: FOC79_03735
Entry
FOC79_03735       CDS       T06623                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
adc  Abiotrophia defectiva
Pathway
adc03030  DNA replication
adc03430  Mismatch repair
adc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:adc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FOC79_03735 (dnaX)
   03430 Mismatch repair
    FOC79_03735 (dnaX)
   03440 Homologous recombination
    FOC79_03735 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:adc03032]
    FOC79_03735 (dnaX)
   03400 DNA repair and recombination proteins [BR:adc03400]
    FOC79_03735 (dnaX)
Enzymes [BR:adc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FOC79_03735 (dnaX)
DNA replication proteins [BR:adc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FOC79_03735 (dnaX)
DNA repair and recombination proteins [BR:adc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FOC79_03735 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_30 RuvB_N AAA_5 AAA_22 AAA_19 TIP49 AAA_2 AAA_7 AAA_assoc_2 Rad17 AAA_24 AAA_14 AAA_18 AAA_16 AAA_28 TniB DNA_pol3_gamma3 RNA_helicase nSTAND3
Other DBs
NCBI-ProteinID: QKH46785
Position
complement(812649..814616)
AA seq 655 aa
MSYQALYRVWRPQSFDELVGQPLIAETLKNAVKNQQLSHAYLFTGPRGTGKTSAAKILAK
AVNCPHQTDGNPCNQCELCQAITAGQLSDVIEIDAASNNGVEEIRDLRDKVRYAPSQATY
KVYIIDEVHMLTTGAFNALLKTLEEPPAQVLFILATTEPHKIPATIISRTQRFDFGRISQ
ADLVGRMQYILEQDGIDFEAEALAVIARAANGGMRDSLSLLDQALSYNRSAVTVQSALEV
TGSLSQLVYIDYLTALQAQDGPKALSILQASLQEGKQANRFVEELILFCRDLLLTLNSKD
NFTLLTEAELKPLRQAGDNCFYYNLIERLNQALNQMRFATQADLFVEVATIELAQEVANE
PVASGLESGTVADLVRQVQALEAKVRQLEAQLRAGAPAQAVPSPQAPAEDDQPRVPRERP
AGQRQAYHLDTDAIYAVLNEATRQDVSQLKSGWAAWLESLPPQDRVRLTGAEVQAAGPER
ILLAFKSQDFCGRVQQDADFVQELSRQLARHFDRPVALAFVLQSEWSQVRQTYKVLYDQA
GGPIKIGAVAEPIRLALEAEPLEAEQTSPPSDDFQSLEQVMMDLPEAPEASEPGTDLFGL
PMETPEPAQPVADQEDLPTVDPVFAQAPDQDSLPPVVSQALALFGQDVVDIDYEK
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgagttatcaagccttatatcgggtctggcggccccaaagttttgacgagttggtggga
caacccctcatcgctgaaaccctgaaaaatgcggtcaagaaccagcaattaagccacgcc
tatttgttcaccgggccacggggaacagggaagacctctgcggccaagattctggccaag
gcggtcaactgcccacaccagacagatggcaatccctgcaaccagtgtgaactttgccag
gccattacagctggccaattaagcgacgtcattgagattgacgcggcctccaacaacggg
gtcgaggaaatccgtgacctgcgggacaaagtgcgctatgcgccgagtcaagcgacctac
aaggtttatatcatcgacgaggtccatatgttgaccaccggggcctttaatgccctgctc
aaaaccttagaagagccaccggctcaggttctcttcatcctagcgacgacggaacctcat
aagattccagccaccattatctcgcggacccaacgcttcgacttcggccgcattagccag
gccgacttagtcggtcgcatgcagtacattctggaacaagatgggattgactttgaagcg
gaagccctagcagtgattgcgcgggccgctaatggtgggatgcgggacagcttgagtttg
ttagaccaagccctttcctataatcgctcagcggtgactgttcaatctgccttggaagtg
acagggtccttgtctcagctcgtctatatcgattacctgactgccctgcaagcccaggac
gggcctaaggccttgagcatcctgcaggccagtcttcaagaaggtaagcaggccaaccgc
tttgtggaagagctaattctcttctgccgggacctcttgttgaccttgaattccaaagac
aacttcaccctcctgaccgaagcagaactcaagcctctgcgtcaagctggggacaactgc
ttttattacaatctaattgaaagactgaatcaggccttaaaccaaatgcgttttgctaca
caggccgatctcttcgtagaagtagccaccattgaattggcccaagaggtcgccaatgag
ccagtagcctctggccttgaatcaggcaccgtggccgatcttgtgcgtcaggtgcaagcc
ctggaggccaaggttcgccaattggaagcccagttgcgtgcaggggctcctgctcaagct
gtccctagccctcaagccccagcggaggatgaccaaccaagggtaccgcgcgagcgtcct
gctggccagcgccaagcctatcatttggacacggatgccatctatgccgtcctcaatgaa
gccacacgtcaagacgtcagccagctcaaaagtggctgggctgcttggctagaatccttg
ccaccacaagaccgcgtgcgcttgacgggcgcagaggtacaggcagcaggtcctgaacgt
attctcttggccttcaagagccaggacttttgtggtcgagtccaacaagatgctgatttc
gtccaagaactcagccgccaactggctcgccactttgaccggccagtcgctctggccttt
gtcttacagagtgagtggagtcaggtgcgccagacttataaggtcctctatgatcaagcg
ggcggtccaatcaaaattggcgccgtggcagaacctattaggctagccctagaggcggag
cctctagaagctgaacaaaccagcccaccatcagacgacttccaaagcctggaacaagtc
atgatggacctaccagaggcgccagaagcaagtgagccaggcactgatttgtttggtctg
ccaatggaaacgccagaacccgctcagccagtagcggaccaggaggacttgccgacggtt
gaccctgtcttcgcacaggcaccagatcaggacagcctcccacctgttgtcagccaagcc
ttggccctctttggtcaagatgtggtcgacattgattacgaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (21)   
   Pfam (21)   
All databases (32)   

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