KEGG   Acropora digitifera (stony coral): 107334525
Entry
107334525         CDS       T04352                                 
Name
(RefSeq) THO complex subunit 3-like
  KO
K12880  THO complex subunit 3
Organism
adf  Acropora digitifera (stony coral)
Pathway
adf03013  Nucleocytoplasmic transport
adf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107334525
  09122 Translation
   03013 Nucleocytoplasmic transport
    107334525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adf03019]
    107334525
   03041 Spliceosome [BR:adf03041]
    107334525
Messenger RNA biogenesis [BR:adf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107334525
Spliceosome [BR:adf03041]
 Complex C
  Other components
   EJC/TREX
    107334525
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107334525
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A PD40 RMC1_N NBCH_WD40 Nup160 DPPIV_N IKI3 HSF_DNA-bind
Other DBs
NCBI-GeneID: 107334525
NCBI-ProteinID: XP_015754952
Position
Un
AA seq 166 aa
MAPGDYLNEMKRYFENNSRTKDFIAHTAKVHSVAWSCDGRRLASGSFDRTVSIFVLEKDR
LTKETNHKGHGESVDQLCWHPSSSNFLVTASGDKTIRIWDARASKCVSVVNTKGENINIC
WSPDGNTIAVGNKEDLITFIDARTYKARCDEQFKYEVSECTHLCSR
NT seq 501 nt   +upstreamnt  +downstreamnt
atggcgccgggagactatctgaacgagatgaaacggtattttgaaaacaactcaagaacg
aaagactttatcgcccacacagccaaggttcattctgtagcttggagttgtgacggcaga
agactcgcttcaggctcatttgacagaactgttagcatttttgtgttggagaaggaccgt
ttaactaaagaaacaaatcacaaaggccatggagagagtgttgatcaactttgctggcat
ccaagtagctctaattttctagtgacagcatctggtgataaaacaatcagaatatgggat
gccagagcgagcaagtgtgtatctgttgtaaatactaaaggagaaaacataaatatttgt
tggagccctgatggtaatacaatagcagttgggaacaaggaagatctaataacatttata
gatgcaagaacttataaagcaagatgtgatgaacaattcaaatacgaagtgagtgaatgc
acacatttatgcagcaggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (26)   

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