KEGG   Auricularia subglabra: AURDEDRAFT_55120
Entry
AURDEDRAFT_55120  CDS       T03129                                 
Name
(GenBank) SNF2 family DNA-dependent ATPase
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
adl  Auricularia subglabra
Pathway
adl03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    AURDEDRAFT_55120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:adl03021]
    AURDEDRAFT_55120
   03036 Chromosome and associated proteins [BR:adl03036]
    AURDEDRAFT_55120
Transcription machinery [BR:adl03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     AURDEDRAFT_55120
Chromosome and associated proteins [BR:adl03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    AURDEDRAFT_55120
   RSF complex
    AURDEDRAFT_55120
   WICH complex
    AURDEDRAFT_55120
   B-WICH complex
    AURDEDRAFT_55120
   NORC complex
    AURDEDRAFT_55120
   BRF complex
    AURDEDRAFT_55120
   NuRF complex (fruit fly)
    AURDEDRAFT_55120
SSDB
Motif
Pfam: SNF2-rel_dom SLIDE HAND Helicase_C ResIII DEAD HDA2-3 DBINO AAA_14
Other DBs
NCBI-ProteinID: EJD52770
JGI: 55120
AA seq 1033 aa
MQTSSDKLQKRRKRKDQDAELQAKRAEMDRAKAADSVKRYSHLLGQTELFQHFIDLKKER
DPEYANIIESQTAQTKGKGRKKAADKTARHRKSEKEEDDELLRDTNKEDEDDDQPFVFEE
SPTYIKGGKMRDYQVQGLNWMISLHHNGMNGILADEMGLGKTLQTVSFLGYLRHIRGITG
PHLVVVPKSTLQNWAREFERWTPDASVVVLQGTREERAEIVAKRLLPQDFDILITSYEIC
MREKGALKKFSFEYIVIDEAHRIKNMDSILSQIVRMFLSRGRMLITGTPLQNNLQELFAL
LNFICPEIFSDYKDLESFLHKGDKEEMTEEDASKVVVEALHKILRPFLLRRVKSDVEKSL
LPKKEINIYVGLSDMQRKWYRSVLEKDIDAVNGLTGKKEGKTRLMNIVMQLRKVTCHPYL
FDGAEPGPPYTTGEHLVENSGKMIILDKLLKAMKVKGSRVLIFSQMSRVLDILEDYCLYR
QYQYCRIDGGTAHEDRIASIDEYNKPGSEKFIFLLTTRAGGLGINLTSADIVVLYDSDWN
PQADLQAMDRAHRIGQTKQVYVFRFIAEGSVEERMLERAAQKLRLDQLVIQQGRTQMTKA
ANKDDLLDMIHHGAEKIVNSTDNLMVDDDIEAIIQRGEERTQELNSKYEGLNFEDLSNFK
SDSMGVQQWEGEDFRGGKHKLKGLWIEPTKRERKSNYSIDKYYQEAMRGSSTKVEKAPKA
MRLPKQIQVADFQFCSPRFVELQTKELLWAKKQAEFKVPLREAQGDLDTQEKLEAEQQAE
QDQIEAAEPFTEEDAQEMLQLEQDSFLHWNRRDFQQFIKGLEKHGRDAAAELIAQEIDGK
GASDVQEYAKVFWQRWHTLSDYDKLKQRIDEGQAKRDKDASMANMLKRKIESVRYPMQEL
HLNYPTTKGKIYSEEEDRYLLCRLHYYGLNRDDVYERIKKDISEFPVFRFDWFFKSRTSV
ELQRRCTTLLGMIAKEQDDEKPAKGKSKEKDTEEKKRTFDDAQLDDGSRASTPKGGAKKA
AAAGGSSSKKRKV
NT seq 3102 nt   +upstreamnt  +downstreamnt
atgcaaacctcctccgacaagctgcagaagcggcgcaagcgcaaggaccaggatgcagaa
ctgcaggcgaagcgcgcagagatggatcgtgcgaaggccgccgactccgtcaaacgctac
tcccacctgctcggccagactgagcttttccagcacttcatcgacttgaagaaagaacgc
gatcctgaatatgcgaacatcattgagtcgcagaccgcgcaaaccaagggcaagggtcgc
aagaaggccgcggataaaactgcgcgtcaccgcaagagcgagaaggaagaggatgacgaa
cttctgcgcgacacgaataaagaggacgaagatgacgaccagccattcgtctttgaggag
tcacctacctatatcaagggagggaaaatgcgagactatcaggttcagggcttgaactgg
atgatctcgttgcaccacaatggcatgaacggaatccttgccgacgagatgggtttgggc
aagaccctgcaaacggtatccttccttgggtatctgcggcacattcgtggtatcaccgga
cctcacctcgtcgttgtcccgaagagtacgctgcagaactgggctcgcgagttcgagcgg
tggacgcccgacgcgagcgtcgttgttctccagggcacccgcgaagaacgtgccgagatc
gtcgcgaagcgcttactgccccaagatttcgatatcctcattacgtcgtacgaaatctgc
atgcgcgagaagggcgccctcaaaaagttctcgttcgagtacattgtcatcgacgaggcg
caccgtatcaagaacatggactcgatcctctcccagatcgtccgcatgttcctgtctcgt
gggcgcatgctcatcactggcacgcccctgcaaaacaacttgcaggagctcttcgccctg
ctcaacttcatctgccccgagatcttctccgactacaaggatcttgaaagcttccttcac
aagggcgacaaggaggagatgacagaagaagatgcgagcaaggtcgtcgtcgaggcattg
cataagatcctgcggccattcttgttgcgccgcgtgaagtccgacgtcgagaagtcgctt
cttccgaagaaggagatcaacatctacgtcggcctgtccgacatgcagcggaagtggtat
cgctctgttttggagaaggatatcgacgccgtgaacggccttaccggcaagaaggaaggc
aagacgcggttgatgaacattgtcatgcagttgcgcaaagtcacctgccatccttacctc
ttcgacggcgcagagcccggccctccgtacacgacgggcgaacacctagtcgagaattcg
ggcaagatgataatcctggacaagttgctcaaggcgatgaaagtcaagggctcccgcgtt
ctcatcttcagccagatgagccgcgttctcgatatcttggaggactattgcctctaccgc
cagtaccagtattgccgaattgacgggggcaccgctcacgaggaccgtatcgcatccatc
gacgagtacaacaagcccggtagcgagaagttcatcttcctgctgaccacccgcgctggc
ggcttgggtatcaacctcacatcagcggatattgtggttctttacgatagtgactggaac
cctcaagccgacttgcaggccatggaccgtgctcatcgtatcggccagaccaagcaggtc
tacgtattccggttcatcgcggagggtagtgtcgaggaacgcatgcttgagcgcgcagcg
cagaagttgcgcctcgatcagctcgtcattcagcaaggtcgcacgcagatgaccaaagct
gccaacaaggacgacctattggacatgatccaccacggcgctgagaagatcgtcaactcg
acggataatctcatggtcgacgacgatatcgaggccatcattcagcgcggcgaagagcgt
actcaggagctcaacagcaagtacgagggtctcaactttgaagacttgagcaacttcaag
tcggactcgatgggcgtgcagcaatgggaaggcgaagacttccgcggtggtaaacataaa
ctgaagggtctctggatcgagcccacgaagcgcgagcgcaagagcaactattccatcgac
aagtactatcaggaagccatgcgcggaagctcgacgaaggtcgagaaggctcccaaggcc
atgcgattgccaaagcagattcaggttgccgatttccaattttgctcgcctcggttcgtc
gaactgcaaacgaaagaattgctctgggccaagaagcaggcggaattcaaggtccccttg
cgcgaggcgcagggcgacctcgacacgcaagagaagttggaggccgagcaacaagccgag
caggaccagatcgaagctgccgagccattcacggaggaggacgcccaggagatgttgcag
ctggagcaggactccttcctacactggaatcggcgagacttccagcagttcatcaaggga
ctggagaagcatgggcgcgacgccgcggcggaacttattgcgcaagaaatcgacggcaag
ggcgcctcggacgtgcaggagtacgctaaggtgttctggcagcggtggcacaccctgagt
gactacgacaagctcaagcaacgcatcgatgaaggccaggctaagcgcgacaaggacgcg
tccatggccaacatgctgaagcggaagattgaatccgtccgctatccgatgcaagagctc
cacttgaactatcctacgacgaagggcaagatctacagcgaagaggaagatcgctacctc
ctctgccgcctgcattactacggcctgaatcgggacgatgtctacgagcgtatcaagaag
gatatcagcgagttccctgtcttccgctttgactggttcttcaagagccgcacctctgtc
gagttgcaacggcgatgcaccacgctgctcggcatgatcgccaaggagcaggacgacgag
aagccggcgaagggcaagagcaaagagaaggacacggaggagaagaaacggaccttcgac
gacgcccagctcgacgacggctcccgtgcgtctacgccgaagggcggtgccaagaaagca
gcagccgcgggcggatcctcgtcgaagaagagaaaagtatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (33)   

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