KEGG   Arachis duranensis: 107463512
Entry
107463512         CDS       T04300                                 
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 isoform X1
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
adu  Arachis duranensis
Pathway
adu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107463512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:adu03041]
    107463512
Enzymes [BR:adu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     107463512
Spliceosome [BR:adu03041]
 Complex C
  Other components
   Step II factors
    107463512
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C HA2_N DEAD AAA_22 AAA_19 nSTAND3 PhoH AAA_30 DUF2532 TsaE ABC_tran
Other DBs
NCBI-GeneID: 107463512
NCBI-ProteinID: XP_015937796
UniProt: A0A6P4B7W9
Position
8:complement(49496524..49504335)
AA seq 720 aa
MPSMAKGSHGPCSTGKFSNGKQNRQTEFSARRQKIAQQRKSLPIASVEKRLIEEVQKNDI
LIIVGETGSGKTTQIPQFLFGAGFCRDGKVIGITQPRRVAAITVAKRVAEECGVELGQKV
GYSVRFDDTTSSSTRIKYMTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDILLALLK
NVQSARSRSVADDQGINFGKKNVNVGMSLEKEYGGQSSSFLKKDNHDKYAPLKLIIMSAS
LDARTFSEYFGSAKSVHIQGRQFPVDIFYTLHPEEDYLDASLITIFQIHSKEGPGDILVF
LTGQEEIESVEKLINDRLTQFPEGSQKLQVVPIFAALPSEQQLRVFAPAPSGFRKVILAT
NIAETSVTIPGVKYVIDPGFVKARSYDPGKDMESLIIVPTSKSQALQRSGRAGREGPGKC
FRLYPESEFEKLEDSTKPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRTAIIKSLEQ
LFSLGALTDDCQLSDPVGHQMARLPLDPVYSKALILASQYNCLEEMLITVAMLSVESIFY
APREKQVEARTAIKCFSSPEGDHITLINVYRASNDFLEKRSIEMGKAKFEKAFRKWCKDN
FISSRSLRHARDIHRQIRVHAEQMGLNLASCGDDMLQYRRCLAASFFLNAAVKQPEGTYR
ALASGLVVQIHPSSVLFRQKPECIIFNELVQTNSKYVRNVSRIDYLWLTELAPQYYAVKN
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgccttccatggctaagggaagccatggcccttgttctaccggaaaattctctaatgga
aaacagaatcgtcaaactgagttctctgcacggaggcaaaagatagcacagcagaggaag
tctctcccgatagcttctgttgagaaaagactcattgaagaggtccaaaagaatgatatt
ttgattatcgttggagaaacaggaagtgggaaaaccacacagattccacagttcctgttt
ggtgctggattttgccgtgatggaaaagtgattgggataactcaaccgagacgtgtagct
gccattacagttgcaaaacgggttgctgaagaatgtggtgttgagttgggccagaaagtt
gggtactctgttagatttgatgatactacttccagctcaacaagaattaaatatatgaca
gatggattgcttctaagggaagcattgttggatccatatctttccaagtattctgttata
attgttgatgaagcacatgagagaactgtccacactgatatcttgctggccttgctaaaa
aatgtacaatctgctcggtcaagatctgttgctgatgatcagggcattaactttggaaaa
aagaatgtgaatgttggcatgtcactggagaaagaatacggtggtcagagcagcagtttt
cttaaaaaggataaccacgacaagtatgctccattgaagctaataattatgtctgctagt
cttgatgctcgcactttctccgaatattttggcagtgccaaatctgttcatatccaaggg
agacaatttcctgtggatatattttacacattgcatccagaagaagactatttagatgct
tccttgataacaatattccagattcattcaaaggagggccctggtgatatactagtattt
cttactggtcaagaagagattgaatcagttgaaaagcttatcaatgacagactcactcag
tttcctgaagggagtcagaagcttcaagttgtgcctatatttgcagctcttccatctgag
cagcagttgcgggtctttgcaccagctccgtctgggtttcgcaaggtgatattggcaact
aatattgctgagacatcagtaacaattcctggagtaaagtatgtaatagatcctggcttt
gtcaaagcacgttcttatgatcctggaaaagacatggaatctttgattatagtacctaca
tccaaatcccaggcactgcaaagaagtggccgtgcagggcgtgaaggacctggaaaatgc
tttcgtctatatccagaaagtgaatttgagaagcttgaggattcgacaaagccagagatt
aagcggtgcaacctatctaatgtgattttgcagcttaaggccttgggtgttgatgacata
ttagggtttgattttattgagaaaccttcacggacagcgattatcaaatcattggaacag
ctattttcactaggtgctctaacagatgactgtcagctctctgatcctgttgggcatcaa
atggctcggctgccgttggaccctgtttattccaaagctcttatcttagctagtcagtat
aactgcttagaggagatgttgataaccgtagcaatgctgtctgtggaatccatattttat
gctcctcgggaaaagcaagtagaggcaagaactgcaataaaatgcttctctagtccggag
ggagaccacattactttgattaatgtgtatcgagcatcaaatgatttcttagagaagaga
tcaatagaaatgggcaaagcaaaatttgaaaaggctttcagaaagtggtgtaaggataat
tttattagtagtcgttctcttagacatgctcgtgacatccacaggcaaattagggtacat
gctgaacaaatggggctgaatctagcttcttgtggagatgatatgcttcagtaccgcaga
tgtcttgctgcttcctttttcctcaatgcggccgtaaagcagcctgagggcacatacagg
gccttggcaagtgggctggtggtgcagatccacccatcttctgtattattcaggcaaaaa
ccagagtgtattatttttaatgaacttgttcaaactaatagcaagtacgttcggaatgta
agcagaattgactacctatggttaactgagctggctcctcaatattatgctgtgaaaaat
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (13)   
   Pfam (13)   
All databases (31)   

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