KEGG   Asticcacaulis excentricus: Astex_2112
Entry
Astex_2112        CDS       T01378                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
aex  Asticcacaulis excentricus
Pathway
aex03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Astex_2112
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aex03019]
    Astex_2112
Enzymes [BR:aex01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Astex_2112
Messenger RNA biogenesis [BR:aex03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Astex_2112
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UTP25 ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: ADU13771
UniProt: E8RLV2
Position
1:2279328..2281145
AA seq 605 aa
MTTFKDLGLSASLLSTLEKEGYHTPTPIQAQAIPILLNKHDLLGIAQTGTGKTAAFALPI
LHHILSNRIIPAPRSCRVLVLSPTRELATQIADSFKAYSKGLGLQIATIFGGVKYGPQYK
ALQGGIDILVATPGRLIDHIEQKTIDLKAVEHLVLDEADQMLDMGFIKPIRQVASRLPAQ
RQNLFFSATMPKEIAGLANELLTNPKKVEITPEATTAERVTQQVIFIEQQRKRALLSELY
ADEKLARTLIFTRTKRGADRVAAYLQAGGVEAAAIHGDKNQSQRERALQAFKAGRVRALV
ATDIAARGIDVDNVTHVINYELPFVAEAYVHRIGRTARAGKEGHSITLVADDERKLLKDI
ERITRQRIPSWDRRKDQALKLLDEAILASGQTEKPKTPDRVVEKTARHLDPDAERVHKRS
RNRPNRDERRGNGRDGDNSRGERTFGKKDAFGNRAERQARFERPERTERYDPMASDRAPT
KASREFPAAERAFGDKPRFDGPRGEKPRFDKPKGERPFKKRDDARGEGRSDTRTFDERPA
RPAAERAGERPTGERRVDERKKKPFGKSASGKLGGRKTNTKPRAHHNEPVNRSEGAQLKR
RSRNG
NT seq 1818 nt   +upstreamnt  +downstreamnt
ttgacgaccttcaaagatctgggcctctcggccagccttctctccaccctcgaaaaagag
ggctatcacacccctacccccatccaggcgcaagccatccctatcctgctgaacaagcat
gaccttctgggtatcgcccagaccggtacgggcaagacggcggccttcgccctgcccatc
ctgcaccacatcctcagcaaccgcattataccggctccgcgttcgtgccgggtgctggtc
ctgtcgccgacgcgcgaactggcgacccagattgccgacagcttcaaggcctattccaag
ggtctggggcttcagatcgccaccattttcggcggcgtgaagtacggcccgcaatataag
gctctgcaaggcggcatcgacatcctggttgccacaccgggtcgcctgatcgaccatatc
gaacaaaagactatcgaccttaaggccgtggaacatctcgtcctcgacgaagccgatcaa
atgctcgacatgggcttcatcaagccgatccgtcaggttgcctcgcgcctgccggctcag
cgtcagaacctgttcttctcggccaccatgccgaaggaaatcgccggtctggccaacgaa
ctgctgaccaatccgaaaaaggtcgagatcacgccggaagccactacggccgagcgcgtg
acccagcaggtcatcttcatcgagcagcagcgcaagcgcgcgcttctgtcggagctttat
gccgatgagaagctggcccgcaccctgatctttacgcgcaccaagcgcggggctgaccgc
gtcgccgcctatttgcaggccgggggcgtagaagccgccgccatccacggcgacaagaac
cagtcgcagcgcgaacgcgcgcttcaggcctttaaggcgggtcgcgtgcgcgcgctggtg
gccaccgacattgccgcgcgcggcatcgacgttgataatgtcactcacgtcatcaattac
gaactgcccttcgttgccgaagcctatgtgcaccgtattggccgtaccgcccgcgcgggc
aaggaaggccattcgatcacgctggtcgccgatgatgagcgcaagctcctgaaagacatc
gagcgcatcacgcgtcagcgcatcccgtcgtgggatcgccgcaaggatcaggcgctgaaa
ctgctcgacgaagccatcctcgcctcgggtcagaccgaaaagccgaagacgccggaccgc
gttgtcgaaaagaccgcccgtcacctcgacccggacgccgagcgtgtgcacaagcgttcg
cgtaatcgtcctaatcgcgatgagcgtcggggcaatggccgcgatggcgataattcgcgc
ggtgaacgcacctttggcaagaaggacgccttcggtaaccgcgccgagcgtcaggcccgc
tttgagcgtccggaacgcaccgagcgttacgacccgatggcctctgatcgcgcgccgacc
aaggcgtctcgcgaattcccggcagctgagcgcgcgtttggcgacaagccgcgctttgac
gggccgcgcggcgaaaagccccgcttcgataagccgaagggcgagcgtcccttcaaaaag
cgtgatgacgcccgtggcgaaggccgcagcgatacgcgcaccttcgacgagcgtccggcg
cgcccggcggcggaacgtgccggtgaacgccctacgggtgaacgtcgggtcgatgagcgc
aagaaaaagccgttcggcaagtcggccagcggcaagctcggtggtcgcaagaccaacacc
aagccgcgtgctcatcacaatgagccggtcaaccgttcggaaggcgcgcaactgaagcgc
cgttcgcgtaacggttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

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