KEGG   Aliarcobacter faecis: AFAEC_1787
Entry
AFAEC_1787        CDS       T06664                                 
Symbol
tssH
Name
(GenBank) type VI secretion system, ClpV1 family ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
afc  Aliarcobacter faecis
Pathway
afc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:afc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AFAEC_1787 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:afc02044]
    AFAEC_1787 (tssH)
Secretion system [BR:afc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AFAEC_1787 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 AAA_7 TniB nSTAND3 DUF815 Sigma54_activat RuvB_N AAA_25 RsgA_GTPase Zeta_toxin NACHT AAA_23 AAA_24 Torsin DUF6594
Other DBs
NCBI-ProteinID: QKF73939
Position
complement(1766030..1768555)
AA seq 841 aa
MKIELKELIDSLDIKTKNYLEEGAKRCISRGGNEIILEDIFYVMLINKDSLLSKLFLQYK
IDDKKLLNILESSSKLVTESNNPIFSIAFINFLEESYYTAVIEFSTKIINEECMILSFLE
NLFKYSNTKYFEFFKQIDKEEAKSLIKGLKLKDIEIDKSKNNIKTELEKYTTNLTQLARD
DKLDIVLCREEEIKQAIDILLRRRKNNPILVGEAGVGKSAIVEGLALKIINKEVPIELYD
SEILTLDIGALQAGTSIKGEFERRLQMIIQEVQSSSKPIILFIDEAHTLMGAGGSEGTSD
AANLLKPALARGELRTIAATTWLEYRKYFEKDPALSRRFQKIDIFEPSIDDTITILRGLS
KKYEEVHNVYIEDEALKNTVYLSARYINGRQLPDKAIDVLDTACANVKISKTNIPFEIQK
LEIKIKEKKREQDSLERDDKNSIKDYKKSIIELKSDIERLEKELEEFTNNFIKEKELLEK
LQKEDDKKIRKTLENELVKLHKKSKFIKERVSKDEVAKVISSWTGVPLGSMISEQIKNVM
ELEKNLQSRVIGQNKAIEYLSQFLQIFVSGLKKENSPSGVFLLVGPSGVGKTETARAIAD
FMYGGENFLTVINMTEFQEKHTISRLIGSPPGYVGYGEGGELTDAVRVKPYSVVLFDEIE
KAHPDILNLFYQIFDRGEINDSEGRVIDFRNTTILMTSNLATDLITNLYLSNKNISFGEL
TNTIIPTLSNYLKPALLGRMNVVPYLNLDEEALKNIVKVKLKHIIEQFAKKEIELKLDEN
LLNHIVSLSNSIDTGARNIDLIINLNILPKLSKFYLESIVSKRKITAIKVSIDKNKEIQV
S
NT seq 2526 nt   +upstreamnt  +downstreamnt
atgaaaattgaattaaaagaattaattgatagtttagatataaaaacaaaaaattattta
gaagaaggagcaaaaagatgtatatctagaggtgggaatgagattatacttgaagatatt
ttttatgttatgttaataaataaagatagtttgctctctaaactatttttacaatataaa
atagatgataaaaaattgttaaatatattagaaagtagctcaaaattagtaacagaaagt
aataatccaattttttcaatagctttcataaattttctagaggagtcatattatacagca
gtaattgaattctctacaaaaataataaatgaagagtgtatgattttgtcttttcttgag
aatttatttaaatattctaatactaaatattttgaattttttaaacaaattgataaagaa
gaggcaaaaagtttaataaaagggcttaaattaaaagatattgagatagataaatcaaaa
aacaatataaaaacagagcttgaaaaatatactacaaatttgacacaattggcaagagac
gataagctagatatagtcttatgcagagaagaagagataaaacaggctatagatatttta
ttaagaagaagaaaaaataatccaattttagttggagaagctggtgttggaaaaagtgcg
atagttgaaggtttagctttaaaaattattaataaagaagtaccaattgaactttatgat
tctgaaatattaactttagatataggtgcattacaagcaggaactagtattaaaggagag
tttgaaagaaggcttcaaatgattatacaagaggttcaatctagttctaaaccaataatt
ttatttatagatgaagctcatactttaatgggagcaggtggaagtgaaggaacttctgat
gctgcaaatttattgaaacctgcacttgcaagaggagaacttagaacaatagcagctaca
acatggcttgaatatagaaaatattttgaaaaagatccagcattatcaagaagattccag
aaaattgatatttttgaaccttcaattgatgatactattacaattttaagaggtttatct
aaaaaatatgaagaagtacataatgtctatatagaagatgaagctttaaaaaatacagta
tatttatctgctagatatataaatggaagacaactacctgataaagcaattgatgtttta
gatactgcttgtgcaaatgtaaaaattagtaaaactaatataccttttgaaatacaaaaa
ctagagataaaaattaaagagaaaaaaagagagcaagattctttagaaagagatgataaa
aatagtattaaagattataaaaaatcaattatagaacttaaaagtgatatagaaagactt
gaaaaagagctagaagaatttactaataattttataaaagagaaagagttattagaaaaa
ctacaaaaagaagatgataaaaaaataagaaaaactcttgaaaatgagctagtaaaactt
cataaaaaaagtaagtttatcaaagaaagagtttcaaaagatgaggtggcaaaagttata
tcatcatggactggtgttcctcttggaagtatgattagtgaacaaataaaaaatgtaatg
gaacttgaaaagaatttacaaagtagagttattgggcaaaataaagcaattgaatattta
agtcagtttttacaaatatttgtatctggactaaaaaaagagaattctccttcaggagta
tttttacttgttggaccaagtggtgttggaaaaactgaaacagcaagagcaatagctgat
tttatgtatggtggagaaaattttttaacagttattaatatgacagaatttcaggaaaaa
catactatttcaagattaattggctctcctccaggatatgttggatatggagaaggtgga
gaattaactgatgctgtaagagttaaaccatatagtgttgtattatttgatgaaatagaa
aaagcacaccctgatattttgaatcttttttatcaaatttttgatagaggggagattaat
gattcagaaggaagagtaattgattttagaaatacaactatcttaatgacatcaaatttg
gctacagatttaataacaaatctatatttaagtaataaaaatattagttttggagagctt
acaaatacaattattccaactttatcaaactacttaaaaccagcactcttaggaagaatg
aatgttgttccttatttaaatctagatgaagaagctttaaaaaatattgtgaaagtaaaa
ctaaaacatattattgaacaatttgctaaaaaagagattgaattaaaactagatgaaaat
ttattaaatcatattgtatctttgtcaaatagtattgatacaggggctagaaatattgat
ttaattataaatttaaatattttaccaaagttatcaaagttttacttagaatctattgta
agtaagagaaagattacagcaataaaagtatctattgataaaaataaagagattcaagtt
agttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (21)   
   Pfam (21)   
All databases (27)   

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