KEGG   Aeromonas hydrophila AH10: VU14_21380
Entry
VU14_21380        CDS       T03886                                 
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ahi  Aeromonas hydrophila AH10
Pathway
ahi03420  Nucleotide excision repair
ahi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ahi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    VU14_21380 (uvrD)
   03430 Mismatch repair
    VU14_21380 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ahi03400]
    VU14_21380 (uvrD)
Enzymes [BR:ahi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     VU14_21380 (uvrD)
DNA repair and recombination proteins [BR:ahi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     VU14_21380 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     VU14_21380 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_30 Viral_helicase1 AAA_12
Other DBs
NCBI-ProteinID: AKA19297
Position
complement(4748581..4750752)
AA seq 723 aa
MDVSTLLDGLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMQVERCSPFSIIAV
TFTNKAAAEMRGRVEKVIGDGVRGMWIGTFHGIAHRLLRAHHLDAGLPQDFQILDSDDQY
RLIRRVLKALNLDEKHWAPRAVMGYINGKKDEGLRPGDIDLYGDPVTRTYQQIYKTYQET
CDRSGLVDFAELLLRAHELWLNKPHILEHYRDRFQNILVDEFQDTNGIQYAWLRMLAGDS
GKVMIVGDDDQSIYGWRGAKIENIQRFLTDYQGAETIRLEQNYRSTANILKAANCVIANN
AERLGKELWTEGAEGEPISLYAAFNEVDEARFVVGRLKDWKEKGGLLADCAILYRSNAQS
RVLEEALMQDAMPYRIYGGLRFFERQEIKDAMAYLRLINNRGDDASFERVVNTPTRGIGD
RTLEILRNNARDQGQNLWQSAKALLNDKVLTGRAGNAVRGFVDLIDALEEQVSLLPLHQQ
ADIAIQNSGLKAMYLAEKGEKSQARVENLDELVTACRQYQRPDELEDMSDLSAFLAHAAL
ESGENQADEYADAVQLMTLHSAKGLEFPLVLLVGVEEGMFPSQQSTEESGRLEEERRLCY
VGMTRAMEKLYICYAESRRIYGREMFHKPSRFIREMPAECLEEIRLRTQVSRPTQYGRFS
QNEVQQSFDASGIKLGQRVLHPKFGEGIVLNFEGVGQQSRVQIQFDDVGAKWLVTAYARL
EAL
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggacgtttcaaccctgctcgacgggctcaacgacaagcaaagagatgccgttgcggcg
ccccgcagcaacctgctggtgctggccggtgccggttcgggcaagacccgggtactggtg
caccgtatcgcctggctgatgcaggtggaacgctgttcacccttctccatcatcgcggtc
acctttaccaacaaggcggcggccgagatgcgcggccgggtcgagaaagtgatcggcgac
ggcgtgcgcggcatgtggatcggcaccttccacggtatcgcccaccgtttgctgcgggcc
catcatctggatgcgggcttgccgcaggatttccagatcctcgactccgacgaccagtac
cggctgatccgccgggtgctcaaggcgctcaacctcgacgagaagcactgggccccgcgc
gccgtaatgggctacatcaacggcaagaaagatgaaggcttgcgtcccggcgacatcgac
ctctacggcgaccccgtcacccgcacctatcagcagatctacaagacctatcaggagacc
tgcgatcgctccggtctggtggactttgcagaactcttgctgcgcgcccacgagctgtgg
ctgaacaagccgcacatcctcgagcactaccgcgaccgcttccagaacatcctggtggac
gagtttcaggataccaacggcatccagtacgcctggctgcggatgctggccggcgacagc
ggcaaggtgatgattgtcggcgacgatgaccagtccatctacggctggcgcggcgccaag
atcgagaacatccagcgcttcctgaccgactatcagggcgccgagaccatccgcctcgag
cagaactaccgctccaccgccaatatcctcaaagccgccaactgcgtcatcgccaacaac
gccgagcgccttggcaaggagctgtggaccgagggggccgagggggagccgatttcgctg
tacgccgccttcaacgaggtggacgaggcccgcttcgtggtcggccgcctcaaggattgg
aaggagaaggggggcttgctcgccgactgtgccatcctctaccgctccaacgcccagtcg
cgggtgctggaagaggcgctgatgcaggacgccatgccgtaccgcatctatggcggcctg
cgcttcttcgagcgccaggaaatcaaggacgccatggcgtacctgcgccttatcaacaac
cgtggcgacgacgccagcttcgagcgggtggtcaacaccccgacccgcggcattggcgat
cgcaccctcgaaatcctgcgcaacaatgctcgtgatcagggccagaacctgtggcaatcg
gccaaggcactgctcaatgacaaggtgctgaccggtcgcgccggcaacgcggtgcgcggc
tttgtggatctcatcgacgcgctggaggagcaggtctccctgctgccgctgcaccagcag
gcggatatcgccatccagaactccggcctcaaggcgatgtatctggcggaaaagggcgag
aaatcccaggcgcgggtagagaacctggacgaactggtcaccgcctgccgccagtaccag
cgcccggacgagctggaagacatgagtgatctctccgccttcctcgcccatgcggcactg
gagtccggcgagaatcaggcggacgaatacgccgacgcggtgcagctgatgaccctgcac
agcgccaaggggctggagttcccgctggtgctgctggtcggcgtggaagagggcatgttc
cccagccagcaatctaccgaggagtcgggccggctcgaggaggagcggcgcctctgttat
gtcggcatgacccgcgccatggagaagctctacatctgttatgccgagagccgccgcatc
tacggccgcgagatgttccacaagccgagccgctttatccgcgaaatgcccgccgagtgc
ctggaagagatccggctgcgcacccaggtcagccgccccacccagtacggccgctttagc
cagaacgaggtgcagcagagcttcgacgccagcggcatcaagctcggccagcgggtgctg
catccgaaattcggggaaggcatagtgctcaacttcgaaggggtcggccagcagagccgt
gtacagatccagtttgacgacgtcggcgccaagtggctggtgacggcgtatgcgagattg
gaggcgctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system