KEGG T04657: 106989307

Acinonyx jubatus (cheetah): 106989307

Entry

106989307         CDS       T04657

Name

(RefSeq) collagen alpha-3(V) chain isoform X1

K19721

collagen type V/XI/XXIV/XXVII, alpha

Organism

aju Acinonyx jubatus (cheetah)

Pathway

aju04820

Cytoskeleton in muscle cells

aju04974

Protein digestion and absorption

Brite

KEGG Orthology (KO) [BR:aju00001]
09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106989307
09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    106989307
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:aju00536]
    106989307
Glycosaminoglycan binding proteins [BR:aju00536]
Heparan sulfate / Heparin
  Extracellular matrix molecules
   106989307

SSDB

Motif

Pfam:

Collagen COLFI Laminin_G_2 Laminin_G_3

Other DBs

NCBI-GeneID:

106989307

NCBI-ProteinID:

XP_053075900

Position

A2:158234867..158270560

AA seq 1749 aa
MGSRRGLSQPRAGLCLLLASLQLLLRTQAADPVDVLKALGVRGGQAGVSEGPGFCPQRAP
EGDRAFRVGKATTLGIPTWELFPDGHFPENFSVLITLRGQPANQSVLLSIYDEGGARQLG
LALGPALGLLGDSFSPLPQQVNLMDGRWHRVAISVDGRMVTLVADCEPQPPTLGQGPRFI
STAGLTVLGTQDLGEETFEGDIQELLISPDPQAAFQACERYLPGCDNLDPVGTGAPQGEP
ETPAPRRKGKGKGKKKGRGCKGKGRKKKKNKETLTPSLPPGSLENQTSTDIPQTETPAST
LPPIPTPLVMTTTVTIGHNVTMLEGPLDPDSGTELRTLETKLAKEDKEGGDPTIVPVFRA
AEQPSQTQFQIFSGAGEKGAKGEPAVIEQGQKFEGPPGAPGPRGVVGPSGPPGPPGFPGD
PGLPGPVGLPGIPGIDGIRGLPGTVIMMPFQFASSSLKGPPVSFQQAQAQAVLQQAQLSM
KGPPGPVGLTGRPGPVGLPGYPGQKGEMGEMGPQGPRGLQGPLGPPGREGKMGRSGADGA
RGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGEKGAEGPPGPTGQAGE
PGPRGLIGPRGSPGPLGRPGVLGIDGAPGAKGNVGPPGEPGPPGQQGNPGSQGLPGPQGP
IGTPGEKGPPGNPGIPGIQGSDGPPGHPGHEGPTGEKGAQGPPGSAGPPGYPGPRGVKGT
SGNRGLQGEKGEKGEDGFPGFKGDGGLKGDRGPPGPPGPRGEDGPEGLKGQEGLAGEEGP
PGSAGEKGKLGLPGLPGYPGRPGPKGSTGFPGPLGPLGEKGKRGKAGQPGLEGERGPPGS
RGERGQPGPTGQPGPKGDVGQDGASGIPGEKGLPGLQGPPGFPGPKGPPGPQGKDGRPGH
PGQRGELGFQGQTGPPGPAGVVGPQGKTGEAGPLGERGPPGPPGPPGEQGLPGLEGREGV
KGDLGPPGPLGKEGPPGPRGFPGPQGAPGDPGPIGLKGDKGPLGPVGANGPPGERGPVGP
AGGMGLPGQSGGQGPVGPAGEKGSPGERGSPGPTGKDGIPGPLGLPGPPGAVGPSGEDGD
KGEVGAPGNKGSKGDKGDAGPPGPTGVRGPVGHPGSPGADGAQGRRGPPGLFGQKGDDGV
RGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPHGPSGSEGPPGLPGGVGQ
PGAVGEKGEPGEAGDPGPPGAPGIPGPKGEIGEKGDSGPSGAAGPPGKKGPPGEDGVKGN
VGPTGLPGDLGPPGDPGVSGIDGSPGEKGDPGDVGGPGPPGASGEPGPPGPPGKRGPSGR
MGPEGKEGEKGAKGEPGPDGPPGMTGPVGARGPPGRVGPEGLRGIPGPVGEPGLLGPPGL
MGPPGPLGPSGLPGLKGDAGPKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGPKGE
PGPPGPIGSLGPPGPPGVAGPLGQKGSKGSPGSFGPRGDTGPPGPPGPPGPPAELHGLRR
RRRRRRSVPLEGPEGGLEEVLASLTSLSFELEQMRRPPGTAERPGLVCSELHRNHPHLPD
GEYWIDPNQGCARDALRVFCNFTAGGETCLYPDKKFETVKMASWSKEKPGNWYSTFRRGK
KFSYVDADGSPVNVVQMTFLKLLSATARQSFTYSCQNSAAWLNEAAGDYGRSLRFLGANG
EEVSFNQTTAATITVPYDGCRLRKGQTKTLLEFSSSQVGFLPLWDVAATDFGQTNQKFGF
ELGPVCFSS

NT seq 5250 nt +upstreamnt +downstreamnt
atggggagtcgccgaggcctgagccagccgcgggccggcctctgcctgctcctggcctcg
ctgcagcttctgctccggacgcaggccgcagaccctgtggatgtgctgaaggccctgggt
gtgcgagggggccaggctggggtctctgaagggcctggcttctgcccccagagggcccca
gagggtgaccgggcattcagggttggcaaggccaccacacttgggatccctacgtgggag
ctttttccagatgggcactttcccgagaacttttccgtgctgatcactctgcggggccag
ccagccaaccaatctgtccttctgtccatttatgatgagggtggtgctcggcagctgggc
ctggctctggggccagctctgggtctcctaggtgactccttcagccccctcccccagcag
gtcaacctcatggatggcaggtggcaccgtgtggcaatcagtgtggatggcaggatggtg
actctggtggccgactgtgaacctcagccccccacgttgggccaggggcctcgattcatt
agcacggctggactcactgtgttgggaacccaggatctcggggaggagacttttgaggga
gatattcaggagttgctgataagtccagatcctcaggctgccttccaggcctgtgagcgg
taccttcctggctgtgacaacctggaccctgttggcacaggggccccccagggtgagcca
gaaactccagcccctcgacgtaaggggaagggaaaagggaagaaaaaagggcgaggttgt
aaggggaagggcaggaagaagaagaagaacaaggagactttgaccccaagcctacctcct
ggctccctggagaaccagacctccactgacatcccccaaacagagacaccagcttcaact
ttacctccgattcccacgcctttggtcatgaccaccactgtgactattggccacaatgtc
accatgctagaggggcccctggaccctgacagtggaacagaactgaggaccctggagact
aagttagccaaagaagacaaagaaggaggtgaccctaccattgtccctgtcttccgggca
gcagagcagccgtcacagacccagttccagattttttctggtgctggagagaagggagca
aaaggggaaccagcagtgattgaacagggacagaagtttgagggacctccaggagcccca
ggaccccgaggggtggtcggcccctcaggccctcccggccccccaggattccctggagac
cctggtctaccgggtcctgttggcctccccggaatccctggcatcgatgggatccggggt
ctaccaggcactgtgatcatgatgccgttccagtttgcaagcagctccctcaaaggaccc
ccagtctccttccagcaagcccaggcgcaggcagtcctgcaacaggctcagctgtctatg
aaaggtcctcctggcccggtggggctcactgggcgcccaggccctgtgggtctccctggg
tatcccggtcagaaaggagagatgggagaaatggggccacagggtccccgaggccttcag
ggacctcttgggccccctggccgggagggaaagatgggccgctctggagcagatggggcc
cggggcctcccaggggacacaggacctaagggtgatcggggctttgacggcctgccaggg
ctgcctggtgagaagggccaaaggggtgactttggccatgtggggcaacctggcccccca
ggagaggatggtgagaagggagcagagggacctccggggcccacaggccaggctggggaa
ccgggcccccgaggactgatcggccctagaggctcccctggtcccctgggacgcccgggt
gtacttgggattgatggtgctccgggagccaagggaaatgtgggtcctcccggagaacca
ggccctccaggacagcagggaaatcctggatcccagggactccctggcccccaggggccc
attggcactcctggggagaagggcccccctggaaacccaggtattccaggcattcaagga
tctgatggccctccgggtcacccaggccatgagggtcccacaggagagaaaggggcccag
ggtccaccagggtcagcaggacccccgggctatcctggacctcggggtgtgaagggtacc
tctggcaaccgtggcctccagggggagaaaggagagaagggagaggatggcttcccaggc
ttcaagggcgatggggggcttaaaggagatcggggaccccccgggcctcctggtcctcgg
ggagaagatggtcccgaagggctgaaggggcaggaggggctggccggcgaggaggggccc
ccaggctcagctggggagaagggcaagctggggttgccaggtctcccaggttacccagga
cgtccaggccctaagggatctactggctttcctgggccgctgggacccttaggagaaaaa
gggaagcggggcaaagcggggcagccgggcctggaaggggagcgggggccaccaggctcc
cgtggagagaggggccaaccgggtcccaccgggcaaccgggccccaagggtgatgtgggc
caggacggggcctctgggatccctggggaaaagggcctcccaggtctgcagggccctcct
ggattccccgggccaaagggtccccctggtccccaggggaaggacgggcgtcccgggcat
cctggacaaagaggagaactgggcttccaaggtcagacaggcccacctggaccagctggt
gtcgtgggtcctcagggaaagacaggagaagcaggacctctgggcgagaggggcccccca
ggcccgcctggacctccaggtgaacaaggtcttccaggcctggaaggcagagagggtgtc
aagggagacctggggccccccgggccccttgggaaggaagggccgcctggacccaggggc
ttccccggcccccaaggagcccctggtgaccccggacctattggtttaaagggtgacaaa
ggccccctgggccctgttggagccaatggccctcctggggagcggggtcctgtgggcccg
gcaggaggcatggggcttcctggccaaagtggaggccaaggccctgttggccctgcaggc
gagaaggggtccccgggcgaacgtggctcccctggccccaccggcaaagatgggatccca
gggcccctggggcttcctggaccgccgggagctgttgggccttctggtgaggatggggac
aagggggaagtgggtgcccctggcaacaaagggagcaaaggcgataaaggggatgcgggc
ccgcctggaccaacaggggtacggggtcccgtgggacacccaggctccccgggagcagat
ggggctcagggacgcaggggaccaccaggcctctttgggcagaagggagatgatggagtg
agaggcttcgttggggtgattggcccccctggcctgcagggactgccgggccctcctgga
gagaaaggggaggtcggagatgtagggtccatgggtccccatggagctccaggccctagg
ggtccccatggccccagtggatcggagggccctccagggctgcctgggggagttggtcaa
ccgggcgctgtgggcgagaagggtgagccaggggaggctggagacccaggacccccagga
gccccaggcatccctgggcccaagggagaaattggtgaaaagggggactcaggtccatct
ggggctgctggacccccaggcaagaaaggcccccctggagaggatggagtcaaagggaac
gtgggccccactgggctcccaggagatctaggcccccccggagacccaggagtttcgggt
atagacggctccccaggagagaagggagaccctggtgatgttgggggaccgggtccgcct
ggagcttctggggagcctggcccccctgggccccccggcaagaggggtccttcaggccgc
atgggtccagaaggcaaagaaggggagaaaggagccaagggggagccaggtcccgacggg
cccccagggatgacgggcccagtgggggctcgagggccccctggacgtgtggggcctgag
ggtcttcgggggatccccggccctgtgggtgaaccaggcctcctgggacctcctggactg
atgggccctcctggacccctggggccctctggccttccaggattgaagggagatgctggc
cccaagggggaaaaaggccacattggattaattggcctcatcggcccccctggggaagct
ggtgagaaaggggatcaggggttgccaggcgtgcagggcccccccggccccaagggagaa
cccggtccccccggtcccatcggctctctgggcccccctgggcccccaggtgtggcgggt
cctctgggacagaagggctcaaaaggttccccgggatcctttggtccccgtggcgacact
ggcccccctgggccccctggccctccgggtcccccggccgagctgcacgggctgcgccgg
cggcggcggcggcggcgctctgtgcccctggagggcccggagggcggcctggaggaggtg
ctggcctcgctcacgtcgctgagcttcgaactggagcagatgcggcgccctcccggcaca
gctgagcgcccgggcctcgtatgcagtgagctgcaccgcaaccacccgcacctgccggat
ggggaatactggattgaccccaaccagggctgtgcgcgggacgcgctcagggttttctgc
aacttcacggctggaggagagacctgcctctatcccgacaagaagtttgagaccgtgaaa
atggcctcctggtccaaggaaaagccgggaaactggtacagcacattccgtcgagggaag
aagttctcctacgtggacgctgacgggtctccggtgaacgtggtgcagatgaccttcctg
aagttgctgagtgccacagcccgccagagcttcacctactcctgccagaactctgccgcc
tggctgaacgaagctgcaggcgactacggccgctccctccgcttcctcggggccaacggg
gaagaggtgtccttcaaccagacgacagcagccaccatcactgtcccctacgatggctgc
cggctccgcaagggacagacgaagaccctcttggagttcagctcttcccaagtggggttt
ctgcctctgtgggatgtggcggctactgacttcggccagacgaaccagaagtttgggttt
gaactgggccctgtctgctttagcagctga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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