KEGG T05687: AV939

Alteromonas sp. Mac1: AV939_01155

Entry

AV939_01155       CDS       T05687

Name

(GenBank) ABC-ATPase UvrA

K03701

excinuclease ABC subunit A

Organism

ale Alteromonas sp. Mac1

Pathway

ale03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:ale00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AV939_01155
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ale03400]
    AV939_01155
DNA repair and recombination proteins [BR:ale03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AV939_01155
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AV939_01155

SSDB

Motif

Pfam:

UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 AAA_23 nSTAND1 RsgA_GTPase DnaJ_CXXCXGXG nSTAND3 SLFN-g3_helicase AAA_24 AAA_25 NACHT Viral_helicase1 MMR_HSR1 ScfRs Zn_Tnp_IS1595

Other DBs

NCBI-ProteinID:

AMJ85305

Position

complement(273851..276685)

AA seq 944 aa
MDKIEIRGARTHNLKNIDLTLPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLMFARVGTPRC
PDHDVPLDAQTVSQMVDKVLAMPEGSKLMLLAPIVKERKGEHLKTLQNLSAQGFIRARID
GDVCDLSDPPPLDLHKKHTIEVVVDRFKVRDDLALRLSESFETALALAGGNALVADMDNS
DAEEIVFSANFACPHCGYSISELEPRLFSFNNPAGACPTCDGLGTRQFFDPTRVVGNDEL
SLAGGAVRGWDKRSYYYFQMLQSVADHYEFDLTGPFGELDEKHKDIVLYGSKGKSLAFKY
INERGDVMERKHPFEGIIPNMERRYRETESNAVREELAKYLSQQHCSSCNGTRLRVEARN
VFIEDTTLPTIADKSIADAYEFFENLSLTGQKAQIAEKILKEILDRLRFLVNVGLNYLSL
SRSADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLRHLRDLGNT
VLVVEHDEDAIREADYIVDIGPGAGVHGGEIIAEGQLEDILASEDSLTGKYLSGREKIII
PEVRTPIKDDKWLELKGATGNNLKSVDLRVPMGVMTCVTGVSGSGKSTLINDTFYKIAHC
ELNKATTSEPAPYISMTGLDQLDKVVDIDQSPIGRTPRSNPATYAGIFTPIREIFAGTQE
ARSRGYKPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCQGKRYNRETLEVKY
KDKNIHEVLEMTVEDARDFFDPIPAIARKLQTLKEVGLAYIRLGQAATTLSGGEAQRVKL
AKELSKRDTGQTLYILDEPTTGLHFHDIKQLLAVLHRLRDHGNTVVVIEHNLDVVKTADW
IIDLGPEGGSGGGQIIAEGTPEVVAESKVSHTGRFLKPMLEAQA

NT seq 2835 nt +upstreamnt +downstreamnt
atggataaaatcgagatacgcggtgctcgcacccacaatttgaaaaatatcgatttaaca
ctgccacgagacaagctggtagtgataactgggctgtcaggctcaggtaaatcgtcttta
gctttcgataccctatacgcagaaggtcaacgtcgttacgttgagtcgttgtctgcgtat
gcccgtcagtttttatctatgatggaaaaacctgatgttgaccatatagagggtttgtca
ccggctatatccattgagcaaaagtcaacgtcacacaaccctcgttcaaccgtgggtact
attaccgaaatttacgactaccttcgtttgatgtttgcccgtgttggcacgccacgatgc
ccagatcacgatgtgccgcttgatgcgcaaaccgtgagtcagatggtagacaaggtgctg
gcaatgccagaaggcagcaagttaatgctgctagcacctatcgtgaaagaacgtaaaggt
gaacatttaaaaactctgcagaatttgtctgcccagggttttattcgtgcgcgaatagac
ggcgatgtatgtgacttatccgatccaccgccattagatttacacaaaaagcatactatc
gaagtggtagtagaccgctttaaagtgcgcgatgacttagcgctgcgcttatcagaatct
tttgaaaccgcattagcgttagctggcggcaatgcgcttgtagccgacatggacaacagc
gatgctgaagaaattgtattttcagctaacttcgcgtgcccgcactgtggttacagtatt
agtgaattagagcctagattattctcgttcaataaccctgctggggcgtgcccaacctgt
gatggtttaggtacacgacagttcttcgacccaacacgtgtggtgggtaacgacgagtta
agccttgcaggcggcgcagtgcgtggctgggacaaacgcagttattattattttcagatg
ctgcaatcggttgccgatcattacgaattcgaccttactggccccttcggcgagctagat
gaaaaacacaaagacattgtgctgtatggctctaaaggtaagtcgttagcgtttaagtat
attaacgaacgcggcgatgtaatggagcgtaagcatccgtttgaaggcattattccaaat
atggagcgccgctatcgggaaaccgagtctaacgcggtacgtgaagaacttgctaaatac
ttaagccaacagcactgtagcagctgtaatggtacacgcttgcgcgtagaagcccgtaat
gtctttattgaagacactacactgcctaccattgcggataaatctattgccgatgcctac
gagtttttcgaaaacttatcgttaacaggccaaaaagcccaaatagcggagaaaattcta
aaagaaattctcgatcgtttacgcttcttggttaacgttggcttgaactacttatccctt
tcacgcagtgccgataccctctcgggcggtgaagcgcagcgtattcgcttggcgagccaa
attggtgctggattagtaggtgtaatgtacgttcttgatgagccttctattgggcttcac
caacgtgacaacgaacgcttattgaagacccttagacacttgcgtgatttgggtaacacg
gtattggtggtagagcacgacgaagacgccattcgtgaagccgattatattgtagatatt
ggccctggagccggtgtacatggcggtgaaattattgctgaaggtcagcttgaagatatt
ctagcaagtgaagactcacttactggaaaatacttatctggccgtgaaaaaattattatt
cctgaagttcgcacacctattaaagatgataaatggttggagctaaaaggggccacaggc
aacaacttgaagtcagtagacttgcgagtgcctatgggcgtgatgacctgcgtaaccggt
gtatctggttcaggcaaatctacccttattaatgacaccttttataaaatcgcccactgt
gaattaaacaaagctactacctctgagccagcgccttatatttcgatgacggggttagat
cagcttgataaggtggtcgatatcgaccagagccctattggtagaacaccgcgttcaaac
cctgcaacttacgccggaattttcacgcctattcgtgaaatattcgccggtacacaggaa
gcacgttctcgcggttataaaccaggtcgctttagctttaacgtgaaaggcggtcgctgt
gaagcgtgtcagggcgacggtgtaattaaagtagaaatgcacttcttacccgatgtatac
gtgccgtgtgacgtctgccaaggcaagcgctacaaccgcgaaaccttggaagtgaaatac
aaagacaagaacattcacgaagtgctagagatgacggtagaagatgctcgagatttcttc
gatcccattcctgccattgcccgtaaactgcaaacgctgaaagaagtaggcttggcttat
attcgtttgggccaagcagccactaccttatcgggcggtgaagcacagcgggtaaaatta
gccaaagaactgtcgaaacgtgataccggccaaaccctgtatattttggatgagcccacc
acagggctgcatttccacgatattaaacagttactagccgtactgcaccgactccgtgac
catggcaacacagtggtggttatcgaacacaatcttgatgtggtcaaaactgccgactgg
atcatcgacttaggccctgaaggtggctcaggcggtggtcaaattattgctgaaggtacg
ccagaagtagtggctgaatctaaggtttctcataccggccgattcttaaagccaatgctt
gaagcacaagcttaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (19)   
   Pfam (19)   
All databases (25)   

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