KEGG   Austrofundulus limnaeus (annual killifish): 106533832
Entry
106533832         CDS       T06063                                 
Symbol
dhx30
Name
(RefSeq) putative ATP-dependent RNA helicase DHX30
  KO
K13185  ATP-dependent RNA helicase DHX30 [EC:5.6.2.6]
Organism
alim  Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:alim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:alim03041]
    106533832 (dhx30)
   03029 Mitochondrial biogenesis [BR:alim03029]
    106533832 (dhx30)
Enzymes [BR:alim01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     106533832 (dhx30)
Spliceosome [BR:alim03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    106533832 (dhx30)
Mitochondrial biogenesis [BR:alim03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    106533832 (dhx30)
SSDB
Motif
Pfam: Helicase_C OB_NTP_bind DEAD AAA_22 HA2_C dsrm NACHT Dicer_dimer AAA_19 HA2_N FtsK_SpoIIIE nSTAND3 ATPase AAA_16 ABC_tran DUF2811
Other DBs
NCBI-GeneID: 106533832
NCBI-ProteinID: XP_013885728
UniProt: A0A2I4D0I0
Position
Unknown
AA seq 1151 aa
MMAVVGLVRLRALCSLTKCGHTGVKTXSNWRVDMRWFRTKPKNFQEHSAYCFGNREVDKA
DDLLKEFPYPKRLLNDTIAQSLGVKELSHLIQYSCTDQAGVKKSTVTLRWPCTIEEEGYA
SKKVDAEQLAAAAACFRLKELGVIGPDNKLPKRKSGQKRVPSHSLSYDKWADNVVGEDKC
SPPKEDSLSQALSVFPQPKHLLASVVQTATSTSAIHDMLRYRIVNTRPSECELTLLWPEK
MTFTATARNRKAAENTVAALACMKLKELELLDEDNKPLTQAKYHQEKVREAGLREKRPFR
LEIPENLKQKMRAYLEQYPAATEVQKLWEEEEERGQQAVDQEEEEEEDFVKDAITGAPYR
TLSEQQAKLLSIHLQKEWENSEPGFSVELPVDAHRQRVVSAVRSSRVVVIAGETGCGKTT
RIPRFLLEEHVQCGEGAVCNVLVTQPRRISAVSVAHRVAHELGPQLKHHLGYQVRLESQC
PKHSGGSMLFLTVGVLLKKLQSNPTLKGISHVVVDEVHERDINTDLLLALLRSSLEKNPD
LRVVLMSATGNNQKLAEYFGGCPIVKVPGFMHPVKDKYLEDMLREMGRPSLGENKVEMNS
QGEIEATPDLDLVVDVIEHIDRHGEPGAVLCFLPGWQDIKEVQDKLEKKPHFSSGSHMIL
PLHSSLSVADQQTVFQRPPVGLRKIVLATNIAETSITIDDIVHVVDAGTHKEQKYDPQTK
VSCLDTVWISRSNVTQRKGRAGRCQPGHSYHLFPRKHLESLTHFPVPEILRTPLQNLVLQ
AKVHSPNCKAVDFLSQVLDSPEREAVRDAVKCLQDIGVLDSMETLTPLGERVACMSCDPQ
LGKAVVLSSIFRCVLPVLSVVACLTKDPFHNSLQNRALVKKAKKKLSDSSYSDYLVFSRA
VLGWRRVQWEGEREDRDDYLDDYTLSKSSLRFINGLISQFSYNLQDAGLVSQAFECQHHT
SLYNQHSSQDELLKAVMLAGLYPNLIKVKKGIVTKKGQFRANNIVFRTVSGPVLLHRSSV
NREENLPSRWLTFFSAVKSDGNVFIRDSSVVHPLALLLLTDRDIKEKVNGDSVEVSFRGC
SLMRCELSSETWELLWELRTAIQTMLYRNLNDPSNSNTTQDEHLISVLVELLNGTESNPF
VQNHSVESEVD
NT seq 3456 nt   +upstreamnt  +downstreamnt
atgatggcggtggtcggtctcgtgcgactgagagcgctgtgcagtttaactaaatgtggc
catacaggagtaaaaacakcatcaaactggagagtagatatgcggtggtttaggacaaaa
cctaaaaactttcaagaacacagcgcgtattgtttcgggaatcgagaagtggataaggct
gatgacctcctgaaggagtttccatatcctaaacgtttattgaacgacaccattgctcag
tcactgggtgtgaaggaactgtcccatctcatccagtacagttgcacggatcaagctggt
gtcaagaagtccactgtcacgttgcggtggccctgcacgattgaagaggagggttatgca
tccaagaaggttgatgctgagcaattagctgctgcagctgcttgcttcaggctcaaggaa
ctgggtgtgattggtccagacaataagctgcccaagagaaagtctggccagaagagagtt
ccttcacattcccttagttatgacaagtgggcagataatgtagtcggggaagataaatgc
tcacctcctaaagaagattccctctctcaagctctttctgtgtttccacaacccaaacat
ctcctggcgagtgtcgtccaaactgccacgtcaaccagtgcaattcatgatatgctgcgc
tacagaatagttaatactaggccaagtgagtgtgagctgactctactttggcctgagaag
atgacgtttacggcgacggcacgcaaccgaaaagcggcggagaatacagttgcagcgctc
gcttgcatgaaactgaaggagcttgagcttctggatgaagacaataaaccactgactcag
gctaagtaccatcaagagaaggtaagggaggctggattgagggagaaacgtccgtttcgg
ctggaaatcccagaaaatctaaagcaaaaaatgagggcataccttgagcagtacccagcg
gctacagaagtacagaaactatgggaagaagaagaggaaaggggacaacaggcagtggac
caggaggaggaggaggaggaagactttgtaaaggatgctattactggcgcaccatacagg
actctgtctgaacaacaggctaagctacttagcatccatctccaaaaggaatgggaaaac
tcggagcccggattcagcgtggagctgccagtcgacgctcaccgtcagcgtgtcgtctcg
gccgtgcgctcctctcgggtggttgtcatcgcgggygagacgggatgcggaaaaacgaca
cgaatcccacgcttcttgctggaggaacacgtacaatgcggggagggcgccgtgtgcaac
gtcctggtgacccagcctcgccgaatcagtgctgtgtctgttgctcatcgtgtcgctcac
gagctgggtccacaacttaaacaccatttgggatatcaggtgagacttgagagtcaatgc
ccaaagcacagtggaggatccatgctcttcctcacagtgggtgtcctgctgaagaagctg
cagtcgaacccgaccctgaaaggaatcagtcacgttgtggtggacgaggtccacgagcga
gacataaacacagacctgctgctggccttgctgcgctccagcttagagaagaaccctgac
ttaagagtagttctcatgagtgctactgggaacaaccagaagctggctgagtattttgga
ggctgccctattgtaaaggtgcctggatttatgcacccagtaaaagacaaatacctggag
gacatgctgagggagatgggacgcccatctttgggtgaaaataaagtagagatgaatagt
cagggggaaattgaggccacgccagatcttgatttggtcgtagatgttatcgaacacatt
gacaggcacggagagccaggtgcagtgctgtgtttcctccctggatggcaggacatcaaa
gaagttcaagacaaacttgagaaaaagccgcacttttcctcaggctcgcacatgatcctg
ccactgcactccagcttatcggtcgctgaccaacagaccgtgttccagcgtcccccagtg
ggcctgaggaagattgtgctcgccactaacatcgctgagacctccattacaatagacgac
attgtacacgtggtggatgcaggcactcacaaagaacaaaaatatgacccacaaacaaaa
gtttcctgtctggacacagtttggatatcacgttctaacgtcacacaaagaaaagggaga
gcaggacgttgtcagccagggcattcctatcacctttttccaaggaaacatctggagtcg
ttgactcacttccctgtccctgagatcctgcgtaccccgctgcagaatttagttttgcag
gcaaaagtccacagtccaaactgcaaggctgtggattttttgtcccaagtgttggatagt
ccagagcgagaagcggtgagagatgctgtcaaatgtcttcaagacataggagttttggac
agcatggagaccctgacgccgttgggcgagcgtgttgcctgtatgtcatgtgacccacag
ttgggcaaagccgtggttctgagttctatattcagatgtgttctgccagtgttgtctgta
gtcgcctgtctcaccaaagacccattccacaatagcctgcagaacagggcccttgtcaag
aaggccaagaagaaactgagtgactctagttacagcgactatctggtgttcagtagagcc
gttctgggctggaggagagtccagtgggagggagagagagaagacagagacgactatttg
gacgactacactctttccaaatccagtctccgatttattaacggccttatttctcagttc
agttacaaccttcaggatgcagggctggtttctcaggcatttgaatgccagcatcacact
tctctctacaatcagcacagcagccaggatgagctgctgaaagctgtgatgctagctgga
ctgtatcctaaccttattaaggtgaagaagggtattgtgaccaaaaaagggcaatttcgt
gccaacaatatagttttccgcacagtcagtggcccggtgttgcttcatcgctcttcagtt
aacagagaagaaaatctccccagccgttggctgaccttttttagtgctgtcaagtctgat
ggaaatgttttcatcagagactcctctgtagtccatccactcgccctgctgctgctcact
gatcgtgacatcaaagagaaagtaaacggcgattcagtggaggtgtcgttccgtggatgc
tccctgatgcgctgcgagctgtcatctgagacgtgggagctgctttgggagctacgcacc
gccattcagaccatgctgtaccgaaacctgaacgatcccagcaactctaacaccactcaa
gacgaacacctcatatctgtactcgtagagctgctaaacggtaccgagtcaaaccctttt
gttcagaatcacagcgtagaaagtgaggtggattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (28)   

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