KEGG   Austrofundulus limnaeus (annual killifish): 106535129
Entry
106535129         CDS       T06063                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF168-like
  KO
K20779  E3 ubiquitin-protein ligase RNF168 [EC:2.3.2.31]
Organism
alim  Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:alim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:alim04121]
    106535129
   03400 DNA repair and recombination proteins [BR:alim03400]
    106535129
Enzymes [BR:alim01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     106535129
Ubiquitin system [BR:alim04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    106535129
DNA repair and recombination proteins [BR:alim03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Ubiquitin ligases
     106535129
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_4 zf-C3HC4_3 Prok-RING_4 zf-RING_2 zf-RING_5 zf-RING_4 U-box DUF3482 DUF1644
Other DBs
NCBI-GeneID: 106535129
NCBI-ProteinID: XP_013887498
UniProt: A0A2I4D5H1
Position
Unknown
AA seq 194 aa
MMKMSPLSGVDMDTGGDRESTLTRDDCLCPVCLEIFMEPVTLPCTHTFCKTCFLESVDKS
TLCCPLCRKRVSTWARLNSRRNTLVDQQLWTRIQNSFPQQCQRRLSGQDTDDEYHPVSGG
PRVSRPGELRQEYEDEVTKLMEERRAQDEEEKRASEELIQKLLMEEEELLQEERRSKDED
EQLARQLSNQLVSA
NT seq 585 nt   +upstreamnt  +downstreamnt
atgatgaagatgtctccgctgtccggtgtggacatggacacaggcggagacagagagtcc
acgctgacccgggacgactgtctctgtccggtttgtctggagatcttcatggaacctgtc
acacttccctgcacacacaccttctgcaagacctgcttcctggagtctgtggacaagtcc
acgctctgctgcccgctctgcaggaagcgggtctccacctgggcccgactcaacagcagg
aggaacacgctggtggaccagcagctctggacccgcatccagaacagtttccctcagcag
tgtcagcgccggctgagtggccaggacacagacgatgaataccacccagtgtctggtggt
cccagggtcagccgtcctggagagctgcggcaggagtacgaggatgaggtgactaagctg
atggaggagcgacgggcgcaggacgaagaggagaagcgagccagtgaggagctgatccag
aagctgctgatggaggaagaggagctgctacaggaggagaggaggagtaaggacgaggac
gagcagctggcccgacagctcagcaaccagctggtcagtgcgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

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