KEGG   Arabidopsis lyrata (lyrate rockcress): 9314652
Entry
9314652           CDS       T01578                                 
Name
(RefSeq) protein LST8 homolog isoform X1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:aly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    9314652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9314652
Membrane trafficking [BR:aly04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    9314652
   mTORC2 complex
    9314652
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Nup160 eIF2A VID27 CPSF_A
Other DBs
NCBI-GeneID: 9314652
NCBI-ProteinID: XP_020885312
Position
Unknown
AA seq 313 aa
MFENNPDDRPLFLATASYDHTIRLWEARTGTCYLSFAYPDMHVNRLEITPDKGKLVAACN
PYIRLFDLNSMAPHLPVRTFESHTNNVMAVGFQYTGQMMYSGSEDGTVKIWDLRVRECQR
EFRSVSPINTVVLHPNQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDG
TMVVAANERGTCYVWRSLQGIQTMTEFEPLHKLQAHNGYILKCLLSPGNNRYLATASSDK
TVKIWNVDGFKLEKVLTGHRRWVWDCDFSRNGEYLVTASSDTTARLWSMRAGKEVMVYHA
HRRATVCCTLRHD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgtttgaaaacaatccggatgatcgtcccttgtttctcgcaacggcaagttatgatcat
accattcgattatgggaagcccgaaccggtacctgttacctttcttttgcctatcctgat
atgcatgtgaataggcttgagataacccctgataagggtaaacttgtagcagcttgcaat
ccttacatacgactctttgatctcaattccatggcccctcatttacctgtgaggactttt
gaatcacacaccaacaatgttatggcagtaggattccaatatactggacaaatgatgtat
tcaggatcagaagatggcacagttaagatctgggacttgagggttcgagaatgccaaagg
gagtttagaagtgtttcaccaattaacacagtcgttttacacccaaatcagactgaattg
atatctggtgaccaaaacggaaatatacgtgtgtgggatctcagagcagatttgtgtagc
tgtgaactggtaccagaagttggtacacctatacggtctttaacggttatgtgggatggg
acaatggtggttgctgctaacgaacgtggaacatgttatgtatggcgctctttgcaagga
atacaaacgatgacggagtttgagccccttcataagctacaagctcataatggctacatc
cttaaatgtctcctctctcctggaaacaacagatatctagcgaccgcatcatctgataaa
actgtcaaaatatggaacgttgatggtttcaaacttgagaaagttttaacaggacatcga
agatgggtctgggactgtgacttctcaaggaatggagaatatcttgtaacagcatcatcg
gacaccacggctagattgtggtcgatgcgagcgggaaaagaagtgatggtgtaccatgct
catcgcagagccactgtgtgttgtacactccgtcatgattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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