KEGG   Arabidopsis lyrata (lyrate rockcress): 9319096
Entry
9319096           CDS       T01578                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13 isoform X1
  KO
K14805  ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aly03009]
    9319096
Enzymes [BR:aly01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     9319096
Ribosome biogenesis [BR:aly03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    9319096
SSDB
Motif
Pfam: DEAD Helicase_C Helicase_C_2 UTP25 AAA_22
Other DBs
NCBI-GeneID: 9319096
NCBI-ProteinID: XP_020889101
Position
Unknown
AA seq 824 aa
MVAGGKESSSMAKKNKRSHKRKREEDFERIDSLPWSSSIPIGEDDEGETFSTLFSGSGQL
DGGFLSLEEIDEADYHLALPTVENGITERKQAQEDDDVTNETVDEIIEGEGEEEDGEEME
DEDDSESRKIREKKTKKNKEKKKEKKKKKQKKIKEAEKDQDTSDAVSCDDDYKVEEQVEG
EEIPPEFSAWGLMRLHPLLMKSIYHLGFKQPTEIQKACFSIAAYQGKDVIGAAETGSGKT
LAFGLPILQRLLDEREKVGKLYALKGEKAQKYAADGYLRALIITPTRELALQVTDHLKNA
AENLNVKVVPIVGGMSSAKQERLLKGKPEIVVGTPGRLWELMSAGEKHLVELHSLSFFVL
DEADRMVESGHFRELQSIIDLLPVTDRPNEGKMQTVQSSDTVSNAPKKKRQTFVFSATIA
LSSDFRKKLKRGSSKSKPSSSGEVNSIEVLSERAGMRDSVAIIDLTTASILAPKIEESFI
KCEEEEKDAYLYYILSVHGQGRTIVFCTSVAALRHICALLKILGLDVCKLYSDMKQRARL
KAIDRFRASENGILIATDVAARGIDIKNVRTVIHYQLPHSAEVYVHRSGRTARAFADGCS
IALIAPSDSSKFYMLCKSFSKETVKIFPLDSSYMPAVRKRLSLARQIDQIERKGSREKAD
RTWLEKHAESMELELDDDESEEERVDNVRQRKATSAQLNKLQEELSSLLSRPMQPKKFSG
RYFAGAGVSTLMQNQFIELSKQKQLQMQTGGKKKRRKLVVINQNCIEPLQALRAGGNEMM
KMKGQSADKRRDIASLRKKRKEEKIGRRDQRRDQKKKRKLMASS
NT seq 2475 nt   +upstreamnt  +downstreamnt
atggttgcaggcggcaaagaatcttcctcaatggcgaagaagaacaagagaagccataag
agaaaacgagaggaggatttcgaacgcatagattcacttccgtggagctcttcaatacct
atcggagaagacgacgaaggcgaaaccttctccactctattttcaggctcaggccagctc
gacggaggttttctttcacttgaggagattgatgaagctgattaccatctagctcttcct
acggttgaaaatggaataacagagagaaaacaagctcaagaagacgatgatgttaccaac
gagactgttgatgagataattgaaggcgaaggagaagaagaagatggagaagaaatggaa
gacgaggatgactctgagagtcgtaagataagagagaagaaaactaagaagaataaggag
aagaaaaaggagaagaagaagaagaaacagaagaagattaaggaggctgaaaaggatcag
gacacttctgatgcagttagctgtgatgatgattacaaagtagaggagcaagttgaggga
gaagagattcctccggaatttagtgcatggggtttgatgagactccatccactactcatg
aagtcaatataccaccttggattcaagcagccgacagaaattcagaaggcttgtttttcc
attgcagcatatcagggaaaggatgttattggtgctgcggagacaggatctggaaagact
cttgcttttgggttgcccatactgcaacgcctcttagacgaacgggaaaaggttggtaaa
ttgtatgcattgaagggagaaaaagcacagaagtatgctgcagatggctatttacgagct
ctaatcatcactccaactagggaacttgctcttcaggtgacggatcatcttaagaatgct
gccgagaatctcaatgtcaaggtcgttcctattgttggtgggatgtcatcagcgaagcag
gaaagacttttgaaagggaaacctgaaatagttgttggaactccaggaaggttgtgggaa
cttatgtccgctggagaaaagcatcttgtagagctgcattccttatcgttttttgtgttg
gacgaggctgatcgcatggttgaaagtggtcatttcagggagctgcagtctataattgac
ttgcttccggtgacagatagaccaaatgaagggaaaatgcaaactgtgcagagtagtgac
acagtttccaatgccccgaagaagaaaagacaaacttttgttttctcagctaccatagcg
ctgtcttcggatttccgtaaaaagctaaagcgtggctcctcgaagtcaaagccatcatca
tctggtgaagtgaattctattgaggttttatctgaacgagctggaatgagagatagtgtt
gccatcattgatctgacaactgcatctattttggcaccaaagattgaagaatcttttatt
aagtgcgaagaggaggaaaaagatgcttacttgtattatattttgagcgtccatggacaa
gggcgtacaattgttttctgtacatcagtggcagctttgcggcatatctgtgcgctttta
aagattcttggactcgatgtttgcaaactctactcagatatgaagcagcgagctcggttg
aaggcaatcgaccgtttccgtgcaagcgaaaatggcatactcatagcaacagatgttgca
gcaaggggtattgatattaagaatgtccgaactgttattcactaccaacttccacattcg
gcagaagtatatgtacatagaagtgggaggactgctagagcattcgcagatggatgcagt
atagctttgattgcgccaagtgattcgtccaagttttacatgttatgcaagtcattctct
aaggaaaccgtaaagatattccctttggatagctcttatatgccagctgtgaggaagcga
ttatctctagcacgtcaaatagaccagattgagcggaaaggctcacgggagaaagcagac
aggacctggcttgaaaagcatgctgaatcgatggaactcgaattggacgatgacgaaagt
gaagaggaaagagtggacaatgtcaggcagagaaaagcgacctcagcacaacttaataag
ctgcaggaggaacttagctcgctcttatcacgtccgatgcagcccaagaaattttcaggc
cgttactttgctggagctggtgtgtcgactcttatgcagaatcagtttatagagttatcg
aaacaaaaacaactacaaatgcaaactggtggaaagaaaaagagaagaaaacttgttgtc
attaaccagaactgcatcgaacctcttcaagcccttcgtgctggtggtaacgagatgatg
aaaatgaaaggtcagagtgcagacaagaggcgcgatatagcgagcttgaggaagaagaga
aaggaagagaagataggtcggcgtgatcagcgaagggaccagaagaaaaagagaaaacta
atggcttcttcttaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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