KEGG   Aquitalea magnusonii: DLM_1745
Entry
DLM_1745          CDS       T05698                                 
Name
(GenBank) exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
amah  Aquitalea magnusonii
Brite
KEGG Orthology (KO) [BR:amah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amah03400]
    DLM_1745
DNA repair and recombination proteins [BR:amah03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     DLM_1745
    Archaeal homologous recombinant proteins
     DLM_1745
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 AAA_15 ABC_tran AAA_21 APG6_N nSTAND3 cobW RsgA_GTPase ABC_ATPase AAA_18 NTPase_1 AAA_22 DUF87
Other DBs
NCBI-ProteinID: BBF85361
UniProt: A0A3G9GGI7
Position
1826221..1829649
AA seq 1142 aa
MKIRSLRLKNLNSLKGEWTIDFTQPPFRDNGLFAITGPTGAGKSTLLDAICLALYHETPR
LKNISANSNDIMTRHTADCLAEVEFEVKGKIYRAFWSQRRARDKADGALQQARVELADGD
GNILTTHSNDKLKRIAAITGLDFARFTKSMLLAQGGFAAFLNASPNERAELLEELTGTEL
YGQISQRVFEQARDSRQALQQLQAQAGGVELLAETQRSAMQQQLSSLQQQQQMLAEQQQQ
LGQALQWRQQLAQAQQQQQAASLQLEQAQAAITQAAPQLQQLAASAPAQRIAPLYQQWQS
QQQRLTAGQAALQALHARYQHSWQQWQQLNWQGFVLARQQSALLASAQAQAQQQWQQWQA
QQQAQPHLARLGESLPLWRSQFDQHARMLQDSAQAEQEARQLATALAAEQQRMQAQALLC
QQAEADFRHAQQAEQAAALLSQQQDLASLRQQWQSAQQAAQQWQQAILLAGQLRQDWQTA
QDLQQALTRLQTLLPQHTAALATLRSQYRELQEQLADKQRLLELELRIQDLEAQRALLQP
GQPCPLCGSASHPLVQHYQAVDATAARQAVLDKQQALDAVQAQGLQANAALAALQQQLDS
LQQQWQAQQASQQQQWQQWQPLAAALAVQPEAWQQPELLNQAAQAAMQQQEQLQQQLLQA
EDAARHWQQCLQSSQQAQQQWQAAQAALALQQQAVASLQQQWAQAGQQQARLTAQAQAQW
QLLQQSLAQAGHAMPADPPRWLADCARQWQDWQQQQQAMQRLEQQLARLEVQARQAAAQC
DEWQHYWQQLALPEPSAAANTAMAELADITTQLEACQQQRTALAAALAQLQGQQQQVAED
VRQQERQLAEVAQQWQLALQHSPFADEAAFTAACLPESQRTALQTMQQGLDRALQQAEAL
LQAANSRLSALQALAVSPLSLEALQAEQAALDGQRQQLSAESGALQALLDNDAQRRAGLQ
ALLAQIDRQQADCECWQRLDGLIGSAKGDKFRRFAQGLTLDHLVYLANRQLARLQGRYQL
RRKAEGELELEIVDSWQADVCRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDE
GFGTLDAETLEIALDALDSLNASGKMIGVISHVEGMKERIAVQICVTRAGGVGLSALSVV
GG
NT seq 3429 nt   +upstreamnt  +downstreamnt
atgaaaatccgtagcctgcggctgaaaaacctcaactcgctcaagggcgagtggaccatc
gactttacccagccaccgtttcgcgacaatggcctgtttgccattaccggccccaccgga
gccggcaaatccacgctgctcgatgccatctgcctggcgctctaccacgaaaccccacgg
ctgaaaaacatctctgccaacagcaacgacatcatgacccgccacaccgccgactgcctg
gccgaggtggagttcgaggtaaagggcaagatttaccgggcgttctggagccagcgccgg
gcgcgggacaaggccgacggtgccttgcagcaggcacgggtggagttggccgatggcgac
ggaaacattctcactacccacagcaacgacaagctcaagcgcattgccgccatcaccggg
ctggactttgcccgcttcaccaaatccatgctgctggcccagggcggttttgccgctttt
ctgaatgccagccccaatgagcgcgccgagttgctggaagaactgaccggcaccgaactg
tacggccagatttcccagcgcgtgttcgaacaagcgcgtgacagccgccaggcgctgcaa
caattgcaggcacaggccggcggggtggagctgctggccgaaacgcagcgcagcgccatg
cagcagcaactgagcagcctgcagcagcaacagcagatgctggccgagcagcagcaacag
cttggccaggccctgcaatggcgacagcaactggcacaggctcagcagcaacagcaggca
gccagcctgcaactggaacaggcccaagccgccatcacccaggcggccccgcaattacag
caactggcagccagcgcaccggcccagcgcattgcgccgctatatcaacaatggcaaagc
cagcagcaacgcctgactgcgggccaggccgctttgcaagcgctgcatgcgcgctaccag
cacagttggcagcaatggcagcaactaaactggcaaggctttgtgctggcgcggcagcaa
tctgccctgctggcctccgcgcaggcacaggcgcagcagcaatggcagcagtggcaagca
cagcaacaggcccagccacacttggcgcgactgggcgagtctttgccgctctggcgcagc
cagtttgaccagcatgcccgcatgctgcaggacagcgcacaggcagagcaagaagcccgc
caactggccaccgcactggcggctgagcagcagcgcatgcaggcgcaagccctgctctgt
cagcaggccgaggccgatttccgccacgcgcaacaagccgaacaggccgccgcattgctt
agccagcagcaggaccttgccagcctgcgccagcagtggcagtccgcccagcaagccgcc
cagcagtggcagcaagccatcttgctggccgggcagttgcggcaagactggcagaccgcg
caagacctgcagcaggcgctgacccgactgcagacactgctgccgcagcacacggccgcg
ctggccaccctgcgcagccagtatcgagaactgcaggaacaactggccgacaagcagcgc
ctgctggaactggaactgcgcatccaggatctggaagcccagcgcgcgctattgcaaccg
ggccagccttgccccttgtgtggctcggccagccaccccttggtgcagcactaccaggcg
gtggatgccaccgccgcacgccaggcggtgcttgacaagcagcaagccctggatgcggtg
caggcgcagggcctgcaagccaatgccgcactggcagcgctgcaacagcagttggacagc
ctgcagcagcaatggcaagcacaacaggccagccagcaacagcaatggcagcaatggcag
ccgctggccgctgcgctggcagtgcaaccggaagcatggcagcagccggaattactcaac
caggccgcacaggcggccatgcagcagcaagagcaattacagcagcaactgctgcaggcc
gaggacgccgcccgccactggcagcagtgcttgcagagcagtcagcaagcgcagcagcag
tggcaggccgcgcaagctgcgctggccctgcagcagcaggccgtggccagcttgcaacag
caatgggcgcaggccgggcaacaacaggcacggcttacggcacaagcgcaggcgcagtgg
cagttgctgcagcagtcgctggcccaggcgggccatgccatgccggcagatccgccacgc
tggctggccgactgcgcccggcaatggcaagactggcaacagcaacagcaagcgatgcag
cggctggagcagcaactggcgcggctggaggtgcaagccaggcaggcggcggcccagtgc
gatgaatggcagcactactggcaacaactggccctgccagagccgtcggcagcagcgaac
accgcaatggcggagctggccgacatcacgacgcagctggaagcctgccagcagcagcgg
acagccttggcggccgcgctggcgcagttgcaagggcagcaacagcaagtagcggaggat
gtccgccagcaagagcggcaactggcggaggtcgcgcagcaatggcagctcgccttgcag
cacagtccatttgccgatgaagccgcctttaccgctgcctgcctgccggagagccagcgt
accgcgctgcaaaccatgcagcagggcttggacagggccttgcagcaggcggaagccttg
ctgcaggctgccaacagccggctgagcgcactgcaagcccttgccgtcagtccgctcagc
ctggaagcgctgcaggcagagcaggccgcgctggatgggcagcgtcagcaactgagcgcc
gaaagcggcgcgctgcaggccttgctggataatgatgcccagcgccgtgccggcctgcag
gccttgctggcgcagattgaccgccagcaggcggattgcgaatgctggcagcggctggat
gggctgatcggctcagccaagggcgacaagttccgccgctttgcccagggattgacgctg
gatcatctggtctatctggccaatcgtcagttggcgcgcctgcaggggcgttaccaatta
cggcgcaaggccgagggtgagctggagctggaaattgtcgatagctggcaggcggatgtc
tgtcgtgatacccgcaccctgtcgggcggtgagagttttctggtcagcctggcactggcc
ttggcgctgtcagacctggtcagccacaaaacctccatcgactcgctattcctggatgag
ggctttggcacgctggatgccgaaaccctggagattgcactggatgcgctggacagcctg
aatgccagcggcaagatgataggcgttatcagccatgtggaaggcatgaaggagcgcatt
gcggtgcagatctgcgtgacgcgcgccggtggcgtgggcctgtcggcgctgtcggtggtg
ggcggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (22)   

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