KEGG   Apis mellifera (honey bee): 552529
Entry
552529            CDS       T01057                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
ame  Apis mellifera (honey bee)
Pathway
ame03018  RNA degradation
ame03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ame00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    552529
  09123 Folding, sorting and degradation
   03018 RNA degradation
    552529
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ame03019]
    552529
   03041 Spliceosome [BR:ame03041]
    552529
Messenger RNA biogenesis [BR:ame03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     552529
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     552529
Spliceosome [BR:ame03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    552529
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 552529
NCBI-ProteinID: XP_624908
BEEBASE: GB42778
UniProt: A0A7M7R8Y9
Position
LG9:6568967..6569827
AA seq 138 aa
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDVQMKSRGRGEMKGRGQSQRGRGSGRGTFGRGGRGPAAL
GRGGGNQGNKSQNKARTK
NT seq 417 nt   +upstreamnt  +downstreamnt
atgttacctttatcattattaagaacagctcaaaaccatcctatgctagttgaacttaag
aatggtgaaacatataatggacatttagttagttgtgatagttggatgaatataaatctc
agagaggttatatgtacatctagggatggtgataaattttggagaatgcctgaatgttat
attcgaggtagtacaattaaatatttacgaattcctgatgaagttatagatatggtaaaa
gaagatgtacaaatgaaatcaagaggacgtggagaaatgaaaggaagaggacaaagccaa
cgaggtcgtggtagtggcagaggtacttttggtcgtggtggaagaggtcctgcagctctt
ggtcgtggcggaggtaatcaaggaaataaatctcaaaataaagcaagaacaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   BEEBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (41)   

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