KEGG   Alligator mississippiensis (American alligator): 102566097
Entry
102566097         CDS       T03087                                 
Symbol
DDX52
Name
(RefSeq) DExD-box helicase 52
  KO
K14779  ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:amj03009]
    102566097 (DDX52)
Enzymes [BR:amj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102566097 (DDX52)
Ribosome biogenesis [BR:amj03009]
 Eukaryotic type
  90S particles
   Helicases
    102566097 (DDX52)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA AAA_19
Other DBs
NCBI-GeneID: 102566097
NCBI-ProteinID: XP_014463638
UniProt: A0A151N5R1
Position
Un
AA seq 612 aa
MDSHALFRRLGAGARFDVKRFSRDARRFGVVKDPGPSSAPPASLDFFGPHETGPPSAPGT
DGAAARTPAAEPPGLERKRTRESESSRGKKKKKTSETISASELPENDGILWMSSLEAKLK
NARETGEKKPTAEKLEQLRQEKINHFRNKHKINVQGTDLPEPIATFEQLQKEYKIHPKIM
QNIESAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILTHLKQPMNKGFRA
LIISPTRELASQTHRELVKLSEGTGFRIHMIHKAAEAAKKFGPKSSQKFDVLVTTPNRLI
YLLKQDPPAIDLTRVEWLVVDESDKLFEDGKSGFRDQLASIFLACTSHIIKRAMFSATFA
HDVEQWCKLNLDNVILVSVGARNSAAETVEQELLFVGSETGKLLAMRELVKKGFTPPVLV
FVQSIERAKELFHELIYEGINVDVIHADKTQQQRDNIVHSFRAGKIWVLLCTALLARGID
FKGVNMVINYDFPTSAVEYIHRIGRTGRAGHTGKALTFFTEDDKPLLRSVASVIQRAGCP
VPDYIKHFRKLQSKQKKKFIKKPLEREHIRTMPQYFLEKGKSKKKIIQKNTKEKKKAKAS
KENAQLQTAPES
NT seq 1839 nt   +upstreamnt  +downstreamnt
atggactcgcacgcgctgttccggcgcctgggcgcgggcgcgcgcttcgacgtgaagcgc
ttcagccgcgacgcgcggcgcttcggggtggtgaaagaccccggcccgagctcggcgccc
cccgccagcctggacttcttcggcccccacgagacggggcccccgagtgcccccgggacg
gacggcgccgcagcccggacgcctgccgcggagccgccagggctggaaaggaagagaacg
agagaaagtgagagctcccgggggaagaaaaagaagaaaacttcagaaactatttctgca
tcggagcttcctgaaaatgatgggatattgtggatgtcctcgttggaagcaaagcttaaa
aatgcaagagaaacgggagaaaagaaacccaccgcagaaaaactggaacagctcagacag
gaaaagataaaccatttccgaaacaagcacaagattaatgttcaaggtacagatcttcct
gaaccaattgccacatttgagcaacttcaaaaggagtataaaatccaccctaaaataatg
cagaacattgaatctgctggcttccaggtccccacgccaattcagatgcaagccattcct
gtcatgcttcatggtcgggaacttctggcttcagctcctactggatctgggaagaccttg
gcttttagcattcctatcttaacacacctgaaacagcccatgaacaaaggatttagggca
ctgatcatctctcctactagagaacttgctagtcagacgcacagagagctagtaaagttg
tctgagggaacaggcttcagaatacatatgatccataaagcagctgaagcagccaagaag
tttgggcccaaatcatctcagaagtttgatgtgctagtgaccactccaaatagactcatt
tatttactaaaacaagatcctccggcaatagatttgaccagggttgagtggttggtggtg
gacgagtcggacaaactcttcgaagatgggaagtcagggttccgtgaccagctggcctcc
atcttcctggcttgcacatctcatatcatcaaaagagcgatgttcagtgcaacttttgca
cacgatgtagagcagtggtgtaaactcaacctggataatgtaattttggtgtcagttgga
gcaagaaactctgcagcagagacagtggaacaagagctcttgtttgttggatcggagaca
ggaaagctgctggcaatgcgagagctggttaaaaagggtttcacgcctcccgtacttgtt
tttgtgcagtccattgaaagggctaaagagcttttccatgagcttatttatgaaggtatc
aatgtggatgttatccatgctgacaaaacacagcagcagagagataacatagtgcacagt
tttagagctggaaagatttgggtgcttctatgcacagccttgctggcccgagggattgac
ttcaaaggagtgaatatggtcattaactatgacttcccaaccagtgctgtggaatatatt
cacaggataggtcggactgggagagcaggacatacaggaaaagcactcactttctttact
gaagatgacaaacctttattacgaagtgtagctagtgttattcagcgggctggctgtccc
gtgccagactatataaaacacttccgtaaactgcaaagcaaacaaaagaagaaatttatt
aagaagccactggaaagggagcacattcgtaccatgcctcagtacttcttagaaaaagga
aaaagcaaaaagaaaattatccagaaaaatactaaggaaaagaagaaagctaaagcatcc
aaagaaaatgctcaattgcagactgctccagaaagttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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