KEGG   Ailuropoda melanoleuca (giant panda): 100484892
Entry
100484892         CDS       T01329                                 
Symbol
COL6A5
Name
(RefSeq) collagen alpha-5(VI) chain isoform X1
  KO
K06238  collagen type VI alpha
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04151  PI3K-Akt signaling pathway
aml04510  Focal adhesion
aml04512  ECM-receptor interaction
aml04820  Cytoskeleton in muscle cells
aml04974  Protein digestion and absorption
aml05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:aml00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    100484892 (COL6A5)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100484892 (COL6A5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100484892 (COL6A5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100484892 (COL6A5)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    100484892 (COL6A5)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100484892 (COL6A5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aml04147]
    100484892 (COL6A5)
   00536 Glycosaminoglycan binding proteins [BR:aml00536]
    100484892 (COL6A5)
Exosome [BR:aml04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100484892 (COL6A5)
Glycosaminoglycan binding proteins [BR:aml00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100484892 (COL6A5)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   100484892 (COL6A5)
SSDB
Motif
Pfam: VWA VWA_2 Collagen VWA_3 VWA_CoxE Copine
Other DBs
NCBI-GeneID: 100484892
NCBI-ProteinID: XP_002927782
Ensembl: ENSAMEG00000004820
Position
6:complement(17297327..17428701)
AA seq 2610 aa
MKSLLIIFVLILWTETLADQSPEPGPEYADVVFLVDSSDHLGTKSFPLVKAFIHRMVSSL
PIEAHKYRVAVAQYSDRLHSEFQLGTFKSRNPMLNHLKKNLGFLGGSLRTGHALREAHRT
YFSAPAGGRDKKQFPPILVVLASAQSEDDVEEASKALREDGVRIVSVGLQSASEEELKAM
ATAQFHFNLRSARDLGAFSQNMTQIIKEATQYRDGAAPHSVDVPFPVACQKDSLADLIFL
VDESVGTGQNLRNLQNFLRNIAASMDVRYNCTRLGLMSYSDRTNIISLLNSSTTQYEFQE
QIQKLSVQAGKSNAGAAIEKMRLEAFSESSGSRKAQGVPQIAVLVTHRPSTDEVRDVAIQ
LRLQDVTVFGMNIQGADETQLEEIASYPPRQMVSMLKSYADLETYSKNFQKKLRNEIWSQ
ISTRAEQMDLDRTGCIDTKEADIYFLIDGSTSIQGKHFEQIKEFMLAVTGMFSIGPDKVQ
VGAVQYSDKMRVEFYINDNSNNVNLKNAILNIEQLQGNTYTGEALNFTLSIIKEDRKLRT
SQVPCYLIVLTDGRSTDDVLEPAERLRAEQVTIHAVGIGEAIKVQLQQIAGGEERVSFGQ
NFDSLRSIKNEVVHRICTEKGCEDMKADIMFLVDSSGSIGLENFGKMKTFMKSLLAKIQI
GPDRTHIGVIQFSDKTREEFQLNKYFTQNEISDAIDRMSLIDKNTLTGNALISVDQYFTP
AKGARIGIKKFLILITDGEAQDAVRDPAKALRDKGVVIFSVGVYGANRTQLEEISGDGNL
VFQVESFDDLKAIESKLIFRVCALHDCKNIKVLDIVFVLDHSGSINTQEQENMMALTIHL
VKKADVGSDRVRIGALKYSDYPEILFHLGKYSNRSSVIEHLRRRRSTGGDTYTARALDHT
NMMFTEEYGSRIQQNVKQMLIVITDGVSHDRNLLNETALKLRNKGIDIYAVGVGQADQLE
LEAMAGNKSKTFHVDNFNKLKDIYLPLQESMCINAHEWCDIQEADVVFFCDGSDMVSNSE
FVTMTTFVSELIDHFNIQNQKIKIGLAQFGSGFQKIIELKNSLTIRELKTQIQSIPKSKG
FPRMDLALKKVKAMFDPSSGGRRNAGVPQTLVVITSGDPYYDVADEVKILRNLGICVLVW
GIGNIHKEQLLPLTGHSEKIVTLQDFNKLMNVDVKKRMVREICQSCGKTNCFMDIVVGFD
ISTHLLGQPLFHGHPRLRSYLPGILEDISSIRRVSCGAGSDVQVNVAFKVNNDREFPAKF
QIYQKAIFDSLLQVTVDGPSHLNAQFLQSLWDTFKDQSKSQGQVLLIFSDGLGGESEIML
ENQSDRLREAGLDALLVVSLNTTAHDEFSSFEFGKGFDYRTHLTIGMRELGKMLSQYLGN
IAEKTCCCTFCKCSGTPGPHGSRGLPAAKGSPGLKGSRGHRGEDGDPGRRGDTGPPGDKG
IAGCPGEQGQKGAKGFSGSKGEQGEDGIDGLDGEEGFHGPPGEKGEKGDPGSQGSPGSRG
PPGGYGEKGFPGDPGNPGQNSNTKGQKGSKGEQGRQGRTGQKGTPGNPNSRGNRGREGQR
GPPGALGEPGNRGPEGTQGADGLQGPQGLNGIPGRKGEKGSEGHKGPQGSSGPVGAKGNV
GSPGPSGKKGEPGILGDPGPMGQAGQRGRQGDYGIPGYGPMGRKGIKGPRGFPGDMGQKG
AVGDPGIPGGPGPKGFRGLTRTVGLKGEEGLPGPPGPPGRRGMKGMAGKPVYSQCDLIQF
MRDHSPCWKGTCPVYPTELVFALDQSYGISEQRFNEMREIVISIVNDLNIKESNCPVGAR
VVVVSYDSGTSYLIRRSDYRNKKQLLQLISQIKYRPPTEARDVGNAMRFVARNVFKRTYA
GANVRKVAVFFSNGQAASRSSIITATMEFSALDISPAVFAFNERIFLEAFEFDNTGTFQV
IPVSPNGEYEPLEKFQHCTLCYDKCFPNECIKEISLPEDAYMDVAFLLDNSQTIANDEFK
AVKTLVSSMIDNFKIASDPGISNFGDRIALLSYSPWDSSREKKGVVKTEFGFTTYNDGVL
MKRHIQSSFRQLEGETTIGHTLLWVVENLFPQTPNLRKHKVLFVISAGEYHERKEFLKKV
ALRAKCQGYVIFVISLGSTYKEDMEELASYPLDHHLIQLGRIHKPDLDYITKFIKPFVYS
VRRGFNEYPPPVLENDCRLVSRGEAYQNSDLLLTPEPHEISSGENSFIGQELSARKDSSF
LWEDNASDHLVYIPSHVLMPQELTITYEKDWDSEEIASLTSGHENHGRKEEPGLPNEPGD
TSLREYYMDVAFLIDASQRIGNDEFKEVKAFLISVLDYFHIAPDPLTSMLGDRVAVLSYS
PPGYMPNSEECPVYLEFDLVTYNSIHQMKHHLQDSFQQLNGDVFIGHALQWTIENVFVGT
PNLRKNKVIFVISAGETNPLDKEVLRNVALRAKCQGYSIFVFSFGPIHNDKELEELASHP
LDHHLVQLGRTHKPDLNYIAKFVKPFVHLIRRAINKYPPADLRPKCVNITSPNPENVGSG
NNVFLIPEVYKIETGNSELFDEFGPQEQHSFVLGNNPSNGSETTTDLIQKLYMLFSTGEL
VMNDKEEAHSEEMPALADGKRDKKDGEDSR
NT seq 7833 nt   +upstreamnt  +downstreamnt
atgaagagcctgctaattatattcgtcttaatcctttggactgaaacactggcagatcag
agtccagagccgggccctgagtatgcggatgtcgtgtttctggtggacagctccgaccac
ctggggactaagtccttccccctcgtgaaagcgttcatccacagaatggtcagcagtctg
cccatagaggcccacaagtaccgcgtggccgtggcgcagtacagcgaccggctccacagc
gagttccagctgggcacgttcaagagcaggaaccccatgctgaaccacctcaagaagaac
ttgggcttcctgggcggctccctgcggaccggccacgctctccgggaggcgcacaggacc
tacttctccgcgccggccggcgggagggacaagaagcagtttcccccgattctggtggtc
ctggcctcggcccagtccgaggatgacgtggaagaggcctccaaggccctgcgggaagac
ggggtgagaatcgtctccgtggggctgcagagtgcctctgaggaggagctgaaggccatg
gccaccgctcagtttcatttcaacctccggtcggccagggaccttggcgcgttttcccaa
aacatgacgcagatcatcaaggaggccacccagtacagggacggagcggcccctcacagt
gtagacgttcccttcccagtggcctgtcagaaagattcattagctgacctcatattccta
gtggatgagtcagttggcacaggacaaaatttaaggaacctgcagaatttcctgaggaac
attgccgcctccatggatgtgaggtacaactgcacacgccttggacttatgagttacagt
gatagaacaaacattatttcgcttctaaattcaagcacaacccagtatgaatttcaggag
caaatccagaagctttctgtccaggctgggaaatccaatgctggggctgccattgagaag
atgaggctagaagccttctcagagtcaagtggcagcagaaaggcacagggagtgcctcag
attgcagtcttggtcactcacagaccatctactgatgaggtgcgtgatgtagcaatacaa
cttcggctgcaggatgtgactgtattcggcatgaacatccaaggggctgacgaaacccag
ttagaagaaatagcatcttaccctccgagacaaatggtttccatgctcaaatcctatgca
gacttggaaacttacagtaaaaacttccagaaaaagctccggaatgaaatttggtcccaa
atttctactcgtgctgagcaaatggaccttgacagaactggctgtatagatacaaaagag
gctgatatctatttcctcattgacggctcaaccagcatacagggaaaacacttcgagcaa
atcaaggaatttatgttggctgtgacaggaatgttcagcattggcccagacaaagtccaa
gttggagccgtgcagtattcagataagatgagagtggagttttatatcaatgacaattct
aataatgtgaacttaaagaacgcaattttgaacatcgagcagcttcaaggcaacacctat
accggggaggccctgaatttcacgctgtcaataataaaagaagataggaagcttaggaca
agccaggttccctgttacctcattgtgctgactgatgggaggtccacagatgacgtcctg
gagcctgctgagagattaagggctgagcaagtcaccatccatgcagttggcattggggag
gctataaaagtacaactccaacaaattgctgggggagaagaaagggttagctttgggcag
aactttgattctttaagaagcataaagaatgaagtggttcacagaatctgcactgaaaaa
ggatgtgaagacatgaaggctgacatcatgtttctggtggacagttctggcagtatagga
cttgaaaattttggaaaaatgaaaaccttcatgaaaagcctattagctaagattcagata
ggtccagacagaactcatattggtgtcattcagttcagtgataaaactcgggaagaattc
cagcttaataaatacttcacacaaaatgaaatttctgatgcaatagacagaatgtctctc
atcgacaaaaacactttgactggaaacgcactaatctctgtagatcaatacttcaccccc
gccaagggggcccgtattgggatcaaaaagtttcttattctcatcacggatggagaagca
caagatgctgtgagagaccctgctaaagctcttcgggacaaaggcgtggtcatcttctct
gtgggggtgtatggagccaataggacgcagctggaggagatcagtggggatggcaacctg
gtcttccaagttgagagctttgatgatctaaaggcaatagaaagcaaactcatttttcgt
gtatgtgctctccatgattgtaaaaatattaaagtgttggacattgtgtttgtgctggat
cattcaggcagcataaacacacaagagcaagaaaacatgatggctctaactatccatttg
gtgaagaaagcagatgttggcagcgaccgagttcggattggagctctcaaatactcagac
tatcctgagattcttttccaccttgggaaatactcaaacagatcctcagtcatcgagcac
ctaaggaggcgcaggagcaccggaggggatacctacactgccagggctcttgaccacacg
aacatgatgttcacggaggaatatggcagccgcatccagcaaaacgtgaagcagatgctg
atcgtcatcactgacggggtatcccatgaccgaaatctgctcaacgagacagcattgaaa
ttaagaaacaaaggcattgatatctacgctgtgggtgtaggacaggctgaccaacttgaa
cttgaggctatggcagggaataaaagcaagactttccatgtagataatttcaacaaattg
aaagatatttacctgcctctacaagaaagtatgtgtatcaatgcacatgagtggtgtgac
attcaagaagccgatgtggttttcttttgtgacggctccgacatggtctccaactcagag
tttgttaccatgacaactttcgtgtcagaattaattgatcattttaacattcagaaccag
aagataaaaatcgggttggctcaatttgggagtggcttccaaaaaattatcgagttgaaa
aactctctgactatacgggagttgaagactcaaattcaaagcattcctaagagcaagggg
tttccgcgaatggacctggcccttaaaaaagtgaaagccatgtttgatccatcttccggt
gggagaagaaacgctggtgtccctcaaactttggtagttatcacatccggggatccctac
tatgatgtggcagatgaagtgaaaatcctgagaaacctcggaatttgtgtcctggtttgg
ggcataggaaatattcataaggagcaacttctgccgttaacaggccattccgaaaaaata
gtcaccctccaagactttaataaattaatgaatgtggatgtgaaaaaaagaatggttcgt
gaaatctgccagagctgcgggaaaaccaattgctttatggacatagtggtcgggtttgac
atttccacccacctgctggggcagccgctgttccacggccacccccggctgagatcctac
ctcccaggcatcttagaggacatcagctccatcaggagggtcagctgcggggcaggctca
gacgtgcaggtgaacgtggccttcaaggtgaacaatgaccgagaattccctgccaagttc
caaatctaccagaaagcaatatttgacagcctgctgcaagtcaccgtcgatgggccatct
catctgaatgcgcagttcctgcagtcgctgtgggatacatttaaggatcaatctaaatcg
caaggacaggtgctactcatcttttcagatggtcttgggggtgaaagcgagataatgctt
gaaaatcaatcggacagactcagagaagcaggactcgatgctctgctggtggtgtcccta
aacacgactgcccatgatgaattctccagctttgaatttggaaagggatttgattacagg
actcacctgaccattggcatgagagagctgggcaagatgctgtcacagtacctgggaaac
atcgcagagaagacttgctgctgcacattctgcaagtgttcggggactccaggtcctcat
gggtcccgaggcctaccagctgccaagggttctccgggtctgaaaggcagcagaggacac
cggggagaggacggagaccccggaagacgaggagacactggacccccaggagataaaggg
attgcaggatgtccaggagagcagggtcaaaagggagccaaaggattttctggaagtaag
ggagaacaaggagaggatgggattgacggactggatggggaagagggctttcatggacct
cctggggaaaagggagaaaaaggtgacccaggatctcagggaagcccaggttccagaggt
cccccagggggttatggggagaagggctttccaggagatcctggtaatccaggacaaaac
agtaacaccaaaggacaaaagggctccaaaggagaacaaggaagacaaggtagaactgga
cagaaagggacaccaggcaatcctaattccagaggaaataggggaagggaaggccaaagg
gggcccccaggtgccttgggggagccgggaaatcgtggacctgaaggtacccagggagcc
gacggattacaaggcccacaggggttaaatggaattcccggcaggaaaggagagaaggga
agcgaagggcataaaggacctcagggctcttctgggccagtgggagctaaagggaacgtt
ggaagtcctgggccttcagggaaaaaaggagaacctggaattcttggagatccagggcca
atggggcaagctggacagagaggaagacagggagattacggcatcccaggctatggtcct
atgggacgaaaaggaataaagggcccaagaggattccctggagatatggggcaaaagggt
gctgttggtgatcctggaattcctgggggtcctggacccaaaggatttaggggattaaca
cgcactgtaggcctgaaaggtgaagagggactgccaggacccccaggccctcctggacgg
agaggcatgaaaggcatggcggggaaacccgtatattcccaatgtgatctgatccagttc
atgcgggaccatagtccttgttggaaaggaacgtgtccagtgtacccaacagagctggta
tttgccctggaccagtcctacggtatctccgaacagagatttaatgaaatgagggaaatc
gtcatatccattgtcaatgaccttaacatcaaggaaagtaactgcccggtgggagcgaga
gttgttgtagtttcctatgactcaggcacgagctacctcatccgcaggtcagactaccgt
aacaagaaacagctcctccagcttatttcccaaataaaataccgaccccccacagaagcc
cgagatgttggtaatgcaatgaggtttgtggcccggaacgttttcaagcggacatatgca
ggagccaacgtgaggaaagtcgctgtgtttttcagcaatggacaagcagccagtcggtca
tccatcatcaccgccaccatggagttcagtgccctagacatcagtccggcagtctttgct
tttaacgaaaggattttccttgaggcttttgagtttgacaacactggaacatttcaggtg
atcccagtttctccaaatggagagtatgagccattagaaaaatttcaacactgtacactt
tgctatgataaatgttttccaaatgagtgcatcaaagagatttctttacctgaagatgca
tacatggatgtagccttcctcttagacaattctcagactatagcaaatgatgagtttaag
gctgtgaaaaccttggtgagctctatgattgacaacttcaaaattgcatcagaccctgga
atctcaaactttggcgataggattgccctgttgagctattctccttgggatagttctagg
gaaaagaaaggtgtggtaaaaacagagtttggatttacaacttacaacgacggagtccta
atgaagaggcacatccagtcttccttccgacagctagaaggagaaaccaccatcggccat
accctactgtgggttgtagagaacctcttcccacaaacaccgaacttgagaaaacacaaa
gtcctttttgtgatctcagctggagaatatcatgagagaaaggagttcttgaagaaggtg
gctctgagggccaaatgtcaaggctatgtcatatttgtgatttccctgggctctacatat
aaggaggacatggaggagttagccagctacccacttgatcaccacctgatacagcttggg
agaattcataaaccagatctggattatattacaaagtttataaagccatttgtttactca
gtcagacgaggattcaatgagtacccacccccagtgcttgagaatgactgtagactcgtc
tcaagaggagaggcttatcaaaatagtgatctcctgcttactcctgagccacatgagatt
tcttcaggagagaacagcttcattggccaggaattaagtgcaaggaaagactcgtccttc
ctgtgggaggacaatgcaagtgaccatttggtttacataccaagccatgtacttatgcca
caagaattaacgatcacatatgaaaaagattgggattctgaagaaattgcaagtttaact
tctggacatgaaaaccatggcagaaaagaagaaccaggtcttcctaatgaacctggagat
acctctcttcgagaatattacatggatgtggctttcctcatagatgcctcccaaagaata
ggaaatgatgagtttaaggaagtgaaagcttttctaatctcagtgcttgattattttcac
attgccccagacccactgacctccatgttaggagacagagtggcagtcctgagctattct
cctccaggctatatgcccaacagtgaagaatgccctgtctacctggaatttgatttggtt
acttataacagtatacaccaaatgaaacatcatctccaagactcttttcaacagctcaat
ggagatgtttttattggccatgccctgcagtggacaattgaaaatgtgtttgtaggaacc
cccaacctgaggaaaaacaaagttatctttgttatatctgctggcgaaaccaacccctta
gacaaggaagtcttaagaaatgtagctctgagagccaagtgtcagggctactccatattt
gtgttttcctttggtcctatacacaatgacaaggaattggaagaattagccagccaccca
ctggatcatcacttagtccagcttggccgaacccacaagccagatttgaactatatcgcc
aagtttgtcaagccttttgttcatttaatcagacgtgccatcaacaaatatccccctgca
gatctgagacccaagtgtgttaacatcacctctcccaacccagagaacgttggctcagga
aacaatgtattccttattcctgaggtatataaaatagagacaggaaacagtgagctgttt
gatgaatttggtccccaggagcagcattcctttgtattagggaacaatcctagtaatggt
tctgagactactactgatttgatccagaagttatacatgctcttttcaaccggagaactg
gtgatgaacgataaggaagaggcacattcagaagaaatgccagctctagcagatggtaaa
cgagataaaaaagatggtgaggactcaagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (59)   
   KEGG ORTHOLOGY (1)   
   RefGene (54)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (6)   
   Pfam (6)   
All databases (83)   

Download RDF
DBGET integrated database retrieval system