KEGG   Bradyrhizobium oligotrophicum: S58_34990
Entry
S58_34990         CDS       T02484                                 
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
aol  Bradyrhizobium oligotrophicum
Pathway
aol03420  Nucleotide excision repair
aol03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    S58_34990
   03430 Mismatch repair
    S58_34990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aol03400]
    S58_34990
Enzymes [BR:aol01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     S58_34990
DNA repair and recombination proteins [BR:aol03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     S58_34990
   MMR (mismatch excision repair)
    Other MMR factors
     S58_34990
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_11 AAA_12 ResIII
Other DBs
NCBI-ProteinID: BAM89492
UniProt: M4Z7Z5
Position
complement(3994559..3996658)
AA seq 699 aa
MGTVTRIRPTLSLDDEFADFDVREELERQLEQRLREVELDAGPALKAFQPAADADQLSLI
HAPHHTIRLIAPAGSGKTQTIINRVLHLAKMGTRPERILCLTFDNSAVRALREKVTEQLS
GLSAPHQNFQISTLNAFGYKILRDHFHAEHKQIIEAPRVWRLIKELKDTLASTDEGRKRH
DALPASLRFRFYSEFFGLLKNALFDPRATVPQKFADFMLTSKAGEVFFQSGSTSDEKKLV
IQAVYWMFKEYERLLQRERRMDFDDQKLRAVKCLDSSPNVLSLAQHQFDEIIVDEFQDIN
ELDFDFVSLIAQRARLVITGDDDQAIYGFRGCTPRYIIELEKHLGRQVESFELKRNYRCP
RNIVDHATRLIRHNQWRVEKNPIAHRLDDASIKVIESTTATAEAKMIATTIERVRRRNKE
LKFSDFAVLYRTNAQSLPIQLQFILRDIPYNVREQDNILHNNELEKLLGVLRAKLALSKN
QQPDPADAVLSLRSYFQYVDERILARLERAFEAVPSFFDALAGRSVLTLLPKLRESRFAS
VMQDVAKAPTLFKTLDILAKDFRGLRGMVGSLEDVIDNEVPLGEVYELAASFRGRVDAFV
DTVDNALKRAKEAKTGEEQDGVALATYFKAKGLQWHTVILTSCNEGLIPHKRAPVEDERR
LFYVALTRASSNLVVSYLKTSCKTRVAASTFLTQAGLHG
NT seq 2100 nt   +upstreamnt  +downstreamnt
atggggacggtaacccgcatcaggcccacgctgtcgctggacgacgagttcgccgacttc
gatgtccgcgaagagctcgaacgtcagctcgagcaacggctgcgcgaggtcgaacttgat
gctgggcccgcactgaaagctttccagcctgccgcggatgccgaccaactctcgctcatc
catgcaccccatcacaccattcggctgatcgcgccggccggctcaggaaaaacccagacc
atcatcaacagggtgctgcatctcgccaaaatgggtacccgtcccgagcgcatcctctgt
ctgacattcgataactccgccgtcagggccctacgggagaaggtcacggagcagctttcc
ggcctctccgcgccgcaccagaacttccagataagtacgttgaacgcgttcggctacaag
attttgcgcgaccattttcacgccgagcacaagcagatcatcgaagcgcctcgtgtctgg
cgattgatcaaagagctgaaggacaccctcgcctcgacagacgagggccgtaagcggcac
gacgccctgccagcctctcttcgattccgcttctacagtgaattttttggcctcttgaaa
aatgccctcttcgacccgcgcgcgactgttccgcagaaattcgcggatttcatgctcacc
agcaaagccggtgaggtctttttccaatccggatcaacctccgacgaaaagaaactcgtc
attcaggccgtttactggatgttcaaggaatacgaacgcctgctccagcgcgagcggcgc
atggactttgatgaccagaagctccgcgccgtcaaatgcctggactcgtcccccaacgtc
ctttcactcgcccaacaccagtttgacgaaatcatcgtcgacgaattccaggatatcaac
gagctggatttcgattttgtgtccctgatcgctcagcgggcgcggctggtcatcaccggg
gacgatgatcaggccatctatggcttccggggctgtacgccgcgttacatcatcgaactc
gaaaaacacctcggacgtcaggtcgaaagcttcgagctcaaacgcaactaccgctgcccc
cgcaatatcgtcgaccacgctacgcgactgatccgccataaccaatggcgcgtcgagaag
aatcctatcgcgcaccgtttagacgatgcctccatcaaggtgatcgagtcaacgacggcc
actgccgaagccaagatgatcgccacgaccatcgaacgggtacgccggcgcaacaaggag
ctcaaattctctgacttcgccgtgctctaccgcaccaacgcccagagcctgccgatccag
ttgcagttcatcctccgcgacattccctacaacgttcgtgaacaggacaacattctgcac
aacaatgagttggagaaactgcttggtgtgttgcgtgcaaagctggccctcagcaagaac
cagcagccggacccggctgacgcggtcctgagcctaaggtcatattttcagtacgttgat
gaacggatcctggcgaggctcgaaagggccttcgaggccgtgccttctttctttgacgca
ctagcaggtcgatctgtgttaaccctcctgccgaagctccgggaaagccgttttgcctcc
gtcatgcaggacgtcgcgaaggcgcccacactcttcaagacgctggatattcttgccaag
gatttccgggggcttcgcggcatggtcggcagcctcgaggacgtgatcgataacgaagtc
ccccttggtgaagtctacgaattggccgctagcttccgcggccgcgtcgatgctttcgtc
gacaccgtggacaacgccctcaagcgcgcaaaagaggccaagacgggcgaagagcaagat
ggcgtcgcgctggcgacctacttcaaggccaaggggctgcaatggcacaccgtaatcctg
accagctgcaacgaagggctcattccccacaaacgcgcgcccgtcgaggatgaacggcgc
cttttctatgttgcgttgacgagagcctcttcgaacctggtcgtcagttatctgaagacg
tcctgtaaaacccgcgtggcggccagtacattcctcacgcaggccggtctgcatggctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system