KEGG   Anas platyrhynchos (mallard): 101790929
Entry
101790929         CDS       T02816                                 
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101790929 (DHX36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apla03019]
    101790929 (DHX36)
Enzymes [BR:apla01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     101790929 (DHX36)
Messenger RNA biogenesis [BR:apla03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     101790929 (DHX36)
SSDB
Motif
Pfam: OB_NTP_bind DEAD HA2_C Helicase_C HA2_N AAA_22 AAA_19 nSTAND3 ATPase AAA_14 AAA_23 PhoH Sir1
Other DBs
NCBI-GeneID: 101790929
NCBI-ProteinID: XP_027320349
Ensembl: ENSAPLG00000012597
EnsemblRapid: ENSAPLG00030031586
Position
9:complement(1123024..1142417)
AA seq 990 aa
MSSEQRRGWARGGDGGPAASSSSSCSSSSAGGHGGRGGGGGGGRGRHPSHLKGREIGLWY
ARKQGQRSKETDRQQRAVVRMDERREEQIAQLLTAVQSRSEKEPDAMSWWSGDEDGNTPE
QPAKVKPEVEKAPIKQRPVLEKTFLDRDVEYLFEKNQQDTDLDEQLKEDLRKKKSDPRYI
EMQRFREKLPSYGMRQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCR
IVCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQW
LQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYF
DNCPMIHIPGFTFPVVEYLLEDVIEKLRYMPENTDRRPRWKKGFMQGHISRPEKEEKEEI
YRERWPEYLRQLRGRYSASTIDALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGW
DNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSI
TIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGL
RASLLDDYQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELN
ALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKE
KVADARRKELSKNTKSDHLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSSNTLQMLHNMK
GQFAEHLLAAGFVNSRDPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVK
VCTKTDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDIS
IQKDKDQDTIAVDEWIVFQSPARIAQLVKNLRQELDDLLQEKIENPHPVDWNDTKSRDTA
VLTAIIDLITTQENESARNYAPRFQNERYS
NT seq 2973 nt   +upstreamnt  +downstreamnt
atgagctcggagcagcggcgcggctgggcccggggcggcgatggcggccccgccgcctcc
tcctcctcctcctgctcctcctcctcggccggcgggcacggggggcgcggcgggggcggc
gggggaggccgggggcggcaccccagccacctgaagggccgcgagatcgggctgtggtac
gcgcggaagcagggccagaggagcaaggagacggaccggcagcagcgggccgtggtgcgg
atggacgagcgccgcgaggagcagatcgcgcagctgctgacggccgtgcagagcaggagc
gagaaggagcccgacgccatgtcctggtggtccggggacgaggacggtaatactccagaa
cagcccgcaaaagtgaaaccagaggtggaaaaagctcctatcaaacagagaccagtcttg
gaaaaaacattccttgatcgggatgtggaatacctatttgaaaaaaatcagcaggataca
gatttagatgagcaacttaaagaagacctaagaaagaagaagtctgatcctagatatatt
gaaatgcagagattccgagagaaactcccttcgtatgggatgagacaggaacttgtaaac
cttataaataataatcgagtaactgtgataagtggtgaaaccggctgtggaaagactaca
caagtcacgcagttcatcttggatgactacatagagcgagggaaggggtctacctgcagg
atcgtttgtactcagcctaggaggatcagtgccatctcagtggctgagagagttgctgct
gaaagggcagaagcatgcggtaatggcaagagtacaggataccagattcgtcttcagagt
cggttaccgaggaaacaaggctcaattttatactgtaccacaggaattgtcctacagtgg
cttcagtcagataagcatttgtccagtattagtcatgtagtccttgatgaaattcatgaa
agaaatcttcaatcagatgttttaatgagcattattaaagatcttttgaatgtccgtttg
gatctgaaagtaatactgatgagtgctactttaaatgcagagaagttttctgaatacttt
gataattgtccaatgattcacattcctgggttcactttcccagtggtggagtatcttctt
gaagacgtaattgagaagttgaggtatatgccagaaaacacagaccgtcggccgcggtgg
aagaaaggcttcatgcaagggcatataagcagaccagaaaaagaagaaaaagaggaaatc
tacagggaacgatggccagaatacttaaggcagctgcggggcaggtactcagcgagtact
atagatgccttggaaatgatggacgatgacaaggttgaccttgaccttatagcagcactt
atcagacacattgttttggaagaagaggatggtgcaattctagtgtttcttccaggatgg
gacaacattagcactttgcatgatctcttgatgtcacaagtcatgtttaagtcagatagg
tttattatcatacctttacattcattgatgcctactgttaaccagactcaggtgtttaag
aagaccccgccaggagtaaggaaaatcgtgattgctaccaacattgcagagactagcatt
acaatagatgacgtggtattcgttatagatggtggaaaaataaaggaaactcactttgat
acccagaacaacattagcacaatggcagctgagtgggttagtaaagctaatgccaagcaa
aggaaaggtcgagcaggaagagttcagccaggtcactgctaccatctatacaatggactc
cgtgctagccttctagatgattatcagctacctgagatcttgaggactcctttggaagaa
ctttgcttgcagatcaagattctaaagcttggaggaattgcttattttctgagcaaacta
atggatccgccatctcgtgatgctgtaatgttggccataaatcatctgatggagctgaat
gctttggacagacaagaagagctgactccactaggtgtacatttagcacgattaccagtt
gaaccacatattggaaaaatgattctctttggagctttattctgttgcttggatccagtc
cttacaattgcagcaagcctcagcttcaaagacccttttgtcattcctttgggcaaagag
aaagtagcagatgcaagaagaaaggaactgtcaaagaatacaaaaagtgatcatctgaca
gtggtgaatgctttcacgggctgggaagagactcggcgccgtggattcagaactgagaaa
gactactgctgggaatatttcctgtcttcaaatacactccagatgctgcataacatgaaa
ggacaatttgctgagcatctccttgcagctggatttgtgaatagcagagaccccaaggat
cccaaatctaataccaactcggataatgagaagttgctcaaagcagtcatctgtgctggt
ttatatccgaaagttgcaaagattcggccaagctttagcaaaaagagaaaaatggtgaaa
gtttgcactaagacagatggaacagttaatattcatcctaaatctgttaatgtggaagag
acagagttccattacaactggcttgtgtaccatttgaagatgagaactagcagtatttac
ttatatgattgtacagaagtctctccgtactgcctcttgttctttggaggggatatatcc
attcagaaggataaagatcaggataccattgctgtggatgaatggattgttttccagtct
ccagctagaatagcacagttagttaagaatttaagacaagagctcgatgatctactacag
gaaaaaatagaaaacccacaccccgtggactggaacgatactaaatccagggatacagca
gtactgaccgctattatagacttaatcacaacgcaggagaatgaaagtgccagaaactat
gctccacggtttcagaacgagcgctatagttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (30)   

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