KEGG   Acanthaster planci (crown-of-thorns starfish): 110981332
Entry
110981332         CDS       T05078                                 
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like
  KO
K12815  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6]
Organism
aplc  Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aplc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110981332
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aplc03041]
    110981332
Enzymes [BR:aplc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     110981332
Spliceosome [BR:aplc03041]
 Complex C
  Other components
   Step II factors
    110981332
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C HA2_N DEAD AAA_22 AAA_19 Flavi_DEAD nSTAND3 ResIII SRP54 cobW AAA_23 AAA_16 ATPase_2 Sigma54_activ_2 ATPase T2SSE ABC_tran
Other DBs
NCBI-GeneID: 110981332
NCBI-ProteinID: XP_022094525
UniProt: A0A8B7YPZ8
Position
Unknown
AA seq 1248 aa
MMSHGDESIHRLEGSSDQVGGLIIKKKTTAKEDDKNSFKLPQHRSSLLGLDRLAAAKRKE
REDLEEETKKRSKVTSYRDDWEDGDDDVEEEDYEKESSHKSSHKRQYRAPRIETPSHPGG
VSNAVRDRQRQREKDSRKGGVYASSSKEQEGKNRRDRERDRDRDRRDRDRHRDRHRDDDR
ERRRDRDSERSSRSVRSERSDWERTPSRDDEPGTPRISRGIVTPSRSSWDEDEDSIPRKA
PSAWDFPTPQVPSGRGRERSERGDRSVRSERRSERSSRSSRDRDLDKRGGSRRPVEDTPM
MTPTHRYNSWASNRKRMGITPKISGGDTVERFASESERQEWEEEQKRLDRQWYGSDEGYD
EANNPFASIPEEYTQKREKELLNKASKRMSAQQRQISKDNEKWETNRMLTSGVVTRVDFD
EDFEEDNVKRTHLLVHNIVPPFLDGRIVFTKQPEPVVPVRDTTSDLAQIARKGSLLVRKY
REQKERKKAQHKDWELAGTKLGNLIGIEKQDDKGSEDVNYKSQQQFAEHMKEKTEAASDF
AIKKSLKQQREYLPIYAIRNELLNIIRDNPVVVIVGETGSGKTTQLTQYLHEDGYSKYGI
IGCTQPRRVAAMSVAKRVSEEMGVALGEEVGYAIRFEDVTCEKTIIKYMTDGILLRESLR
ESDLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRQDMKLIVTSATMDSDKFAAFFGNV
PVFEIPGRTFPVDTMFSKTAVEDYVDASVKQAIQIHLQSSPGDILVFMPGQEDIEVTCDV
IAERLGELDNAPQLAILPIYSQLPSDLQAKIFQKAPDGVRKCVVATNIAETSLTVDGIMF
VVDAGYCKLKVYNPRIGMDALQVYPISQANARQRSGRAGRTGPGQCYRLYTERAYKNELL
VTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPQDNMLNSMYQLWILGALDNTGSL
TPLGRQMVEFPLDPALSKMLIVAVEMGCSTEVLTIVSMLSIPSIFYRPKGREEESDQARE
KFAVPESDHLTYLNVYQQWKNNHYSSIWGNEHFIHVKAMRKVREVRQQLKDIMEQQGLNL
VSCGTAWDIVRKCICSAFFHQGARLKGIGEYVNIRTGMPCHLHPTSALFGMGFTPEYIIY
HELVMTSKEYMQCVTAVEGEWLAELGPMFYSVKEAGKSRQANRQMAKANLTAMEEEMQLA
TEELKARKEHEEQKRVTSIRRLQISTPGRKEPKTPASVRRKTPSSFGL
NT seq 3747 nt   +upstreamnt  +downstreamnt
atgatgtcgcacggtgatgagtcaatccaccgtcttgagggatcctcagaccaggtggga
ggactcatcatcaagaagaagaccacagccaaggaggatgacaaaaactccttcaagtta
cctcagcaccgctcctccctcctgggcctggatcggctggctgctgccaagaggaaggag
agggaggaccttgaggaggagactaagaagaggtcaaaggttacctcctacagggatgat
tgggaagatggagatgatgatgtagaggaggaggattatgagaaggaatcctctcacaaa
tcctctcacaaaaggcaataccgagccccccgtattgagaccccctcccaccctggggga
gtgagcaatgctgttagggacagacaaagacagcgagagaaggatagccggaagggcgga
gtctatgcctcctcctccaaagaacaggaggggaagaatcgacgagaccgggagagagac
agggacagagacaggagagatcgtgacagacaccgagacagacacagagacgatgacagg
gagagaaggagggaccgcgactcggagaggagcagtcgtagcgttcgcagtgagaggagt
gactgggagaggacaccaagtagagacgatgagccaggaacgccgagaatctccagaggg
atagtcaccccatcacggtccagttgggacgaggacgaagacagcattccccgcaaagcg
ccctcagcctgggacttccccacgccccaggtgccgtcgggtcggggcagggagcgcagt
gagaggggagatcgcagtgtgcgcagcgaacgccggagcgagcgcagttcccggagcagc
cgggacagagacttggacaaaaggggtggatccagacgtccagtagaggacacccccatg
atgacgccaactcaccgctataactcctgggctagtaacagaaaacgcatgggaatcacc
ccaaagatatccggaggagacacagtggagcgatttgcatctgaatcggaacgccaggag
tgggaggaagaacagaagaggctagatcggcagtggtatggatctgacgaaggctacgat
gaagccaacaatccgtttgcctccatcccagaggagtacacgcagaagagggagaaggaa
ctccttaacaaggcctccaagagaatgtcagctcagcagagacagattagcaaggacaat
gagaaatgggagaccaatcggatgctgaccagtggagtggtgacccgagttgactttgat
gaagactttgaagaggacaacgtgaaacgcacgcatttgttggtccacaacattgtgcca
ccatttcttgacggacgcatcgtgttcaccaagcaaccagagcccgtcgtccctgtcaga
gatacgacctctgacctggcccagattgccaggaaggggtccctgctcgtccgcaagtac
cgagagcagaaagagagaaagaaagcccagcacaaggactgggagctggccgggactaag
ctcgggaacctcatcggaatcgagaaacaggacgacaaggggtcggaggacgtcaactac
aagtcacagcaacagtttgccgagcacatgaaagagaagacagaggccgccagcgacttt
gccatcaaaaagtcgctgaagcagcagcgagagtacctgcccatctacgccatcagaaac
gagctgctcaacatcatcagggacaaccccgtcgtcgtgattgtcggggaaacaggatct
gggaagacgacacaacttacgcagtacttgcatgaggatggttacagtaagtatggcatc
attggctgtactcagcccaggcgtgtggctgccatgtccgtggccaagcgcgtcagcgaa
gagatgggtgtggctctaggggaggaggtgggatatgccatccgatttgaagacgtgact
tgtgagaaaactataatcaagtacatgactgacggtatcctgctgagagaatccctacgc
gagtcagacctggaccactacagcgctatcatcatggacgaggctcacgaacgctccctg
aacaccgatgtgctgtttggactactccgagaggtggttgctaggagacaagacatgaag
ctcattgtcacatcagccacaatggactcggacaaatttgcggccttctttggaaatgtt
cccgtctttgagattcccggtaggacgtttcctgtcgacaccatgttcagcaagaccgcg
gtggaggattacgtggacgcgtccgtcaagcaagccatccagatccacctccagtcatcc
cccggtgacatcctggtcttcatgcccggccaggaggacattgaggtcacctgtgatgtc
atcgcagagagactaggggagctggacaacgcccctcagttggccatcctgcccatctac
tcccagctgccatcagacctgcaagccaagatcttccagaaggccccggacggcgtccgc
aagtgcgtggtggctaccaacattgccgagacatcgctgacagttgatggtatcatgttt
gtagtggacgctggctactgtaagctaaaggtttataacccacggatcggtatggacgcc
ctgcaggtgtaccccatcagccaggctaacgcccgacagagatcaggtagagctggaaga
acaggaccagggcagtgctacagactctacacggagcgagcatacaagaatgaactgcta
gttaccacggtgccagagatacagagaaccaacctggccaatgttgtgctgctgctgaag
tcacttggagtccaggacctcttgcagttccattttatggacccaccccctcaagacaac
atgctcaactctatgtaccagctgtggatcctgggagctctagacaacacgggttccctc
acccctctaggaagacagatggtggagttccctctcgaccctgccctctccaagatgctg
attgttgccgtggagatgggatgcagtactgaagtcctaaccatagtgtccatgctgtcc
atcccttcaatcttctaccggccaaagggcagggaagaagagagtgaccaggccagagag
aagtttgccgtgcccgagagtgaccatctgacctacctcaatgtctaccagcagtggaaa
aacaaccattattcatcaatatggggcaatgaacattttatccacgtcaaagcgatgcgc
aaagtacgcgaggtgcgccagcagctgaaggacatcatggaacaacagggactgaatttg
gtatcctgcggcaccgcctgggatattgtgcgcaagtgtatctgctcagccttctttcac
cagggcgccagactgaagggtatcggcgagtatgtgaatattcgcacaggcatgccgtgc
catcttcacccgactagtgccctctttgggatgggtttcaccccagagtacatcatctac
cacgaactggtcatgacatcaaaggagtacatgcagtgtgtgacggctgtagagggagag
tggcttgccgagttgggtcccatgttctacagcgtcaaggaggctggcaaatccagacag
gccaatcgtcagatggccaaggccaacttaacagccatggaggaagagatgcagctggcc
actgaagagttgaaggccagaaaagaacacgaggaacagaagagagtgacgtccattaga
aggttacaaatttccactccaggaaggaaagagcccaaaactccagcatctgtgcgaagg
aaaacgccctcatcctttggtctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (75)   
   KEGG ORTHOLOGY (1)   
   RefGene (71)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (19)   
   Pfam (19)   
All databases (104)   

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