KEGG   Acetobacter pasteurianus IFO 3283-01: APA01_18940
Entry
APA01_18940       CDS       T00988                                 
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
apt  Acetobacter pasteurianus IFO 3283-01
Pathway
apt00300  Lysine biosynthesis
apt00550  Peptidoglycan biosynthesis
apt01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:apt00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    APA01_18940
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    APA01_18940
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:apt01011]
    APA01_18940
Enzymes [BR:apt01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     APA01_18940
Peptidoglycan biosynthesis and degradation proteins [BR:apt01011]
 Precursor biosynthesis
  Amino acid ligase
   APA01_18940
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase LpxD MCM4_WHD
Other DBs
NCBI-ProteinID: BAI00019
UniProt: C7JCJ0
Position
2058788..2060257
AA seq 489 aa
MSLPLSTLLAAVGLPILPENPEISAITADSRQIKPGTIFAALPGVKTDGRAFIAMAVQNG
AAAVLAPTDTQWPTGVPTCPLILAPNPRHALALMAAVLAGPQPQHLAAITGTNGKTSTAD
FIRQIWALQGFKAAAIGTLGLTGAEDTSISFPALTTPDPVALANGLAALTQAGFNHVALE
ASSHGLEQGRLDGLHLAAAGFTNLTRDHLDYHLTIEAYRTAKLKLFDTLLPQQAIAAANA
DMDAQTLQAIRALAARRNLRLRLVGEQGTTLRLMAHNALPAGQELSIEHNGHTSTVLLPI
PGRFQADNVLLAVALAAQDDAEIADILPLLPHLKGVRGRLERATVLPNGACAYVDYAHTP
DALARLLASLRPHARGKLVVVLGAGGDRDSGKRPLMGQEAIKGADIAIITDDNPRTENPA
SIRAEIKAGAPQALEIADRKQAIAEALSMLKADDVLVVAGKGHEQGQIIGNTILPFDDAA
VLRTLAGHP
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgagccttcccctctccacccttcttgcggctgtagggctgcctatcctgcctgaaaat
cctgaaatttctgccattacagcggatagtcggcagataaagccgggcacaatttttgca
gctttgccgggcgttaaaaccgatggccgagcctttattgcaatggccgtgcaaaatggt
gcggctgcagtgttggctccaacagatacacagtggccaacaggtgtgcccacctgcccg
cttattctggcacccaacccgcgccacgcgctggcgcttatggcggctgttctggcaggg
cctcaaccacagcatctggcggccattaccggcacaaatggcaaaaccagtactgcggat
tttattcgccagatatgggcattacaggggtttaaagctgctgccattggcacacttggc
ctgaccggggcggaagatacgtccatttccttccccgcgcttacaacgccagatccggtt
gctcttgccaatgggctggctgcacttacccaagccgggtttaaccatgttgcactagaa
gcctcatcacacgggttggaacaagggcggctggacggtttgcaccttgcagccgcgggt
tttaccaatctgacgcgagatcatctggattatcatctgacgatcgaagcgtatcgcaca
gccaaactaaagctgtttgatactcttctgccacaacaggccattgccgcagccaatgcc
gatatggatgcgcaaacgcttcaggccatccgtgcccttgccgcccgccgaaacctgcgg
ctaaggctggttggagaacagggtacaacattacgccttatggcacacaatgctcttcct
gctggacaggaactgagcattgagcacaatggccacaccagcacggttctcctccctatt
ccgggacgctttcaggcagataacgtattgctggctgtagctcttgccgcgcaggatgat
gccgagattgcagatattctgccccttctgccgcacctcaaaggggttcgggggcggctg
gaacgtgcaaccgttctgcccaacggggcctgtgcgtatgtagattacgctcacacgcca
gatgcgctggcacggcttttggcatctttgcgcccccacgcacgcggcaagttggttgtt
gttctgggtgctgggggtgatcgtgatagtggcaaacgccctcttatgggtcaggaagcc
attaaaggtgcagatattgccattattacagatgacaacccgcgcacagaaaacccagcc
tccattcgtgcagagataaaagccggtgccccgcaggcgctggaaattgcagatagaaaa
caagcaatagcagaagctctttccatgcttaaagcagacgatgtactggttgtagccggc
aaaggccacgaacagggacagattataggcaataccattttaccgtttgatgatgccgcc
gtgttgcgcacactggcgggccatccatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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