KEGG   Aquicella siphonis: AQUSIP_00680
Entry
AQUSIP_00680      CDS       T06267                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
asip  Aquicella siphonis
Pathway
asip03420  Nucleotide excision repair
asip03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:asip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AQUSIP_00680 (uvrD)
   03430 Mismatch repair
    AQUSIP_00680 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asip03400]
    AQUSIP_00680 (uvrD)
Enzymes [BR:asip01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AQUSIP_00680 (uvrD)
DNA repair and recombination proteins [BR:asip03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AQUSIP_00680 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     AQUSIP_00680 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_11 Viral_helicase1 AAA_22 ResIII InPase
Other DBs
NCBI-ProteinID: VVC74796
UniProt: A0A5E4PEP3
Position
1:complement(73207..75378)
AA seq 723 aa
MILNSLNPAQQEAVRAPLGHQLVLAGAGSGKTRVLTHRIAWLVENEKIAPSRILAVTFTN
KAANEMRARIEKMLHVPAKSMWIGTFHGLSHRFLRAHWQEAGLPQSFQILDSDDQFRMIR
RVIHALNLDEDRFPPKESQWFINAQKEECREPHQVEVRDFTVQTQIRIYQAYHEACLRAG
VIDFADLLLKTYKLLLTNAELRAHYQDRFRCLLVDEFQDTNTIQYAWLKLFAGDSNSVMI
VGDDDQSIYGWRGARIENIQRFSKDFAGARIIRLEQNYRSTGTILKAANALISQNAGRLG
KNLWTEGKDGEPITVYAGFNETDEAFFIVNRIRELKQKSDHVLREMAVLYRSNAQSRVIE
EALMQFGIPYRVYGGLRYFDRQEIKDALAYLRIIANRSDDPAFERIINTPVRGIGDRTLV
SIREHAKSHALTLWDALLQLIEQKHFSTRAETALLSFVNLINTMTERTLALELHKQVEYV
LYASGLIEHYRKEKGEKGLTRLENLEELVNAAHQFSQDGVTDDMPPLAAFLAYAALESSD
EQADAYDDCVQLMTLHSAKGLEFPVVFLAGCEEELFPHYLSMNDPKAIEEERRLCYVGVT
RAMRKLYMTYAEVRRTYGKEAYHRPSRFLHEIPAELIDEIRFRTKTARLGNHAQAYSSGT
GGNHFTTAAETQNAFRVGQEVRHRIFGEGIVLDCEGDGEDMKVKVRFANVGTKVLIASYL
SAK
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgatactcaattcgctcaatccagcacagcaagaagcggtgcgcgcgccgctgggccat
caattggtgcttgccggtgccggcagcggcaagacccgcgtgctgacacaccgtatcgcg
tggctcgttgaaaatgaaaagatcgctccatcccgtatcctggcggtaacctttaccaac
aaggccgccaatgaaatgcgcgcgcgcattgaaaaaatgctgcatgtgccggcaaaaagc
atgtggatagggacatttcacggcctgtctcaccgctttctccgtgcccactggcaggaa
gcgggattgccgcagtctttccagatccttgattcggacgatcagtttcgcatgattcgc
cgtgtcattcatgcgctcaacctggatgaagaccgctttccgcccaaggaatcacaatgg
ttcatcaatgcgcaaaaggaagaatgccgcgagccgcaccaggttgaagtccgcgacttt
accgtccagacccagatccgcatctatcaggcataccatgaagcctgtctgcgcgccggc
gtcattgatttcgcggacctgctcctgaaaacctacaaacttctgctgaccaacgctgaa
ttgcgcgcacactaccaggaccgttttcgctgcctgctggtggatgaattccaggatacc
aataccatacagtacgcctggctgaaattattcgccggcgactccaactcggtcatgatt
gtgggtgatgatgaccagtccatatacggctggcgcggcgcgcgcatcgaaaatatccag
cgcttttccaaggactttgccggagccaggatcatccgcctggaacaaaactaccgctcg
accggcaccatattaaaagccgccaatgcgttaatctcgcagaatgccggccgcctaggc
aaaaacctgtggaccgaaggcaaggacggcgaacccatcacggtttatgccggcttcaat
gaaacagacgaagcctttttcatcgtcaaccgcatacgagaattaaaacagaaaagtgat
catgtcttgcgggaaatggccgttctctaccgctctaacgcgcagtcgcgcgtcatcgaa
gaagcgctcatgcagtttggcatcccgtatcgcgtctacggcgggctgcgttattttgac
cggcaggaaatcaaggatgccctcgcctatttgcgtatcatcgcaaaccgctcggacgat
ccggcgtttgaacgcattatcaacactcccgtacgcggcatcggcgaccgcacactcgtt
tccatacgcgaacacgcgaaaagccatgccctcacgctatgggacgccttgctgcagctg
atagaacagaaacatttttccacccgcgcggaaaccgcgctgctctcctttgtcaacctc
atcaacaccatgacggagcggacgctggcgcttgaattgcacaagcaggttgaatatgta
ttatacgccagcggattgattgaacattaccgcaaggaaaaaggtgaaaaaggcttgacc
cgccttgaaaacctggaagaactggttaacgccgcgcatcagttttcacaagacggcgtc
accgacgacatgccgccgctcgccgcctttctcgcttatgccgccctggaatccagtgat
gaacaggcggatgcgtatgacgactgcgtgcagctcatgactctgcattcagcaaaaggt
ctggaattccccgtggtgttcctggcgggctgtgaagaagaattgttcccgcattacctt
tccatgaacgaccccaaagcgattgaagaagagcgccggctttgttatgtcggcgtgaca
cgcgccatgcgcaaactctatatgacatacgcggaagtcaggcgcacctacggcaaggaa
gcttatcaccggccatcgcggtttttgcatgaaatccccgcggaactcattgatgaaata
cgcttccgcaccaagacagcccggctcggtaaccatgcgcaagcttattcttccggcaca
ggcggaaatcatttcacaaccgctgccgaaacacaaaatgctttccgcgttggacaggaa
gtgcgtcaccggatttttggcgaaggcatcgttctggattgcgaaggcgacggcgaagac
atgaaagtcaaggtgcgctttgcgaatgtcggcaccaaggtactgattgcgagttacctc
agcgcgaaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

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