KEGG   Aquicella siphonis: AQUSIP_24320
Entry
AQUSIP_24320      CDS       T06267                                 
Symbol
vnfA
Name
(GenBank) Nitrogen fixation protein VnfA
  KO
K10943  two-component system, response regulator FlrC
Organism
asip  Aquicella siphonis
Pathway
asip02020  Two-component system
asip02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:asip00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AQUSIP_24320 (vnfA)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AQUSIP_24320 (vnfA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:asip02022]
    AQUSIP_24320 (vnfA)
   02035 Bacterial motility proteins [BR:asip02035]
    AQUSIP_24320 (vnfA)
Two-component system [BR:asip02022]
 Other families
  FlrB-FlrC (polar flagellar synthesis)
   AQUSIP_24320 (vnfA)
Bacterial motility proteins [BR:asip02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    AQUSIP_24320 (vnfA)
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 AAA_2 AAA HTH_30 AAA_22 HTH_11 nSTAND3 MerR AAA_10 AAA_16 ATPase AAA_14 AAA_18 AAA_19 HTH_20 AAA_7 AAA_3
Other DBs
NCBI-ProteinID: VVC77105
UniProt: A0A5E4PKN3
Position
2:172243..173685
AA seq 480 aa
MCFMVSVQCNGEISLTRSRLGTKIAYYLNAGLCNGLNEVSTVKVLVIDTIDNRRKSITAR
LRDRGWIISSMYMISMDNMHSVLTSHDVLVVLDQDEAVVRSILAKIMNQPIKCIFNQHIS
SFTRYVNRQNMIFINSEESNDVEESVIAKIDGWHLDSARLQPIAHDARSKVMLEMARKAA
KTSATVLISGETGTGKEVLAKYIHQHSSFHDGPYITVNCAALPENMMEAILFGYEKGAFT
SAVNTYVGKFEQAQNGTLLLDEIAEMPIGLQAKLLRVLQERELERLSGKRVVRLNLRVIA
ASNRDLKNQVINGLFRKDLYYRLHVLSVRCPALRERLNDILPLAEYFIRHHAKILDKNEP
VLTEGAKNKLVSHVWPGNIRELENVIQRAMIMTEGAVIDAGDISLEEGLYDFEQTDGQGG
YASNIEQFSSKLEESEAKAIMEVLHEADGCRNIAARRLNISPRTLRYKIAKLRAIGLKVP
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgtgcttcatggtttctgtccagtgcaacggagaaatctcactaacacgatcaagactt
ggtacgaaaattgcatattacttgaatgcaggtctctgtaatggattgaatgaggtaagc
acagtgaaggtattggtcattgacaccatcgacaaccgcagaaagtcaattacggcaaga
ttacgtgaccgaggctggattatatcatctatgtatatgattagtatggataatatgcat
agcgttctaaccagccacgatgtgttggtggtattagaccaggatgaggcagtggtaaga
agcatactggccaagatcatgaaccagccgattaaatgtatattcaatcagcatatttcc
tcattcacgcggtatgtgaaccgtcaaaacatgatttttatcaactcggaagaaagtaat
gacgttgaagagtctgttattgcgaaaatagacggatggcatttggacagcgcgagattg
cagcctatcgcgcacgatgcgcgcagcaaggtcatgctggaaatggcccgtaaagccgca
aaaaccagcgcaacagtattaatcagcggagaaacaggaacaggtaaggaagtattggca
aaatatattcatcaacactccagctttcatgatggtccgtatatcacggttaattgtgcc
gcattgccggaaaacatgatggaagcaatattgtttgggtatgaaaaaggggccttcacc
agtgctgtcaacacatatgtgggtaaattcgagcaggcgcagaatgggacgctgcttttg
gatgaaattgctgaaatgccgataggtttgcaggccaagctgttaagagtgttgcaagaa
agggaactggagcgtttaagcggtaaaagagtcgtcagattgaatttgagagtgatcgcg
gcatccaaccgggatttgaaaaaccaggtcatcaacggattattccgcaaggatttatat
tatcgcttgcatgttctctctgtcaggtgccccgctttgagagagcgattgaacgatatt
ttgcccttggcagaatattttatcaggcatcatgcaaagattctggataaaaatgagcct
gtattgactgaaggggcaaagaataagttggtgagtcacgtttggccgggaaacatccgt
gaattggaaaatgtaatacagcgcgccatgattatgacagaaggtgcggtcatcgacgca
ggtgatattagcctggaagagggtctgtatgacttcgagcaaacagatggtcagggtggg
tatgcctctaacatcgagcaattcagttctaaactcgaggaatccgaggctaaagcgatc
atggaggttcttcatgaagcagacggttgtcgaaatattgcggccagaaggctcaatatc
agcccaagaacgcttagatataaaatagcaaagctgcgtgcgattggattaaaagtgcca
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (29)   

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