KEGG   Alligator sinensis (Chinese alligator): 102376414
Entry
102376414         CDS       T02922                                 
Name
(RefSeq) collagen alpha-6(VI) chain-like isoform X1
  KO
K06238  collagen type VI alpha
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn04510  Focal adhesion
asn04512  ECM-receptor interaction
asn04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:asn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102376414
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102376414
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102376414
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:asn04147]
    102376414
   00536 Glycosaminoglycan binding proteins [BR:asn00536]
    102376414
Exosome [BR:asn04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102376414
Glycosaminoglycan binding proteins [BR:asn00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102376414
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   102376414
SSDB
Motif
Pfam: VWA VWA_2 Collagen VWA_3 Kunitz_BPTI VWA_CoxE DUF1194 NYN
Other DBs
NCBI-GeneID: 102376414
NCBI-ProteinID: XP_014381510
UniProt: A0A1U8DW70
Position
Unknown
AA seq 2545 aa
MDNCKLLLILLFAAAFCFTDAQTTACRKATSADIVFLVETSSRIGQENFQKMKDFLYTLV
SSLEVGNDQVRVGLAQYSREPYKVFLLNQYSLKSDILEQIKNLPNRSGGTYTGTALDFIR
TEYFTRAAGSRAEENVPQVVILVSVGESNDEVRTQAKELKVRGISLYVVGINDRDPTELK
KISSRPFKKFLFRTDSFDGLQDLSTSLLQTMCFAIESQIQAFTKHYGDVVFLVDSSVHMG
SSTFEQVKQFAYHVVEQLDIGMDKFRIGLAQYSTESQGEFFLNTYANKEDVLNHIQEYVA
FMGGPLQTGSSLKFLCEAFFTEDAGSRFSQGTPQFAVVITSAKSEDEVLESALKLKEMGV
KVISIGVQNSDRQEMEVIATSPWVYQVDEGDSISQLHQDIINILEPPVQQHHEIMKMPEV
CATVSIADIVFLVDESSSIGLRNFKLIRDFLFTIINALHISPNNVRVGLVLYSDEPRLEF
TLDTFENKLEILHYLQKLPYRGGKTYTGAALDFLRKDVFTRKAGSRKKQGVQQIAVVITG
GQSLDDFTKSATKLRRSGVDIYVVGTQNAFESSQLNKIASYPTRKHVANLESFLQLSNIG
RKIKKWICSEMMVQSFAIPVQTRMMKKGCVEIEEADIYFLIDGSGSIMPNDFQDMKTFMN
EMIDVFQVGADRVCFGVVQYESIPRTQFEIGQYNTMVQLKAAVRVIQQMGGGTKTGDALR
YMKSLFAKASRTNVPQILIVITDGKSQDEVTRAAEELRQEGIIIYAIGIKQAVQEELKDI
ARSEDRMFFVNDFDSLKHIKHDIVHDICSSKACENVKADIIFLVDGSESIHPVDFQKMKN
FIQLIVNRSDIGTDKVRIGLLQFSSQAKEEFQLNSYSTKPGLRRAISEIRQLRSGTLTGK
ALAFASSYFDKSKGGRPEIKQYLIMITDGEAQDSVGEPAKMIRDKGITVYAIGVLQANET
QLVEISGTPGKVLFEDNFDSLIFLEKQILSEICKPEDLCKRTEVADIIFVIHGSSSITDL
QFKSVQQLMMALVNDSVVGKNNVQFGAVVYSVNSKERFSLNEYSTKLDVREAIFNLRPLP
EQGLQIFTARALNFTRERFGVAYGGRASSRGLSQILVLITDRPTAPSDSYNLAAVAKSLK
LDGINIFAVGVDRASRTELEQIVGERERVLFALSYSDLESLHGNLAHKICDKSRPVCENQ
AADVVFLIDGSESISSKNFSTMKSFMKEIVSRFHIAENKARVGVVQYSEDPQKEFYLNEF
YSETAIKEQIDSIRQFKSSTFTGKGLRFVKRLFEPANGGRKNQNIPQTLIVITDGYSSDP
VSEAALALRNDGIYVFAVGIGILRATELLQIAGNVQRVFLVENFARLERIERTIVKEVCD
SSDRPSQDCNIDVSVGIDVSGPVRPTPALHLKKQLQTDLPRFLQQVESLTNVCCTSESQL
NIRFKYQVFGPTGLPLFDSNFEKYNEEIIQKFLAAQITVDTYLNARFLQLLWEDSFEVAS
ANVKVLLVFTDGLDDPVEILRIAADSLLLKGLDALLMVGLDNMPNLSDLQEIEFGRGLGN
KHPLSIRFSDHPGLLQRELENVAERKCCHVACKCYGEIGFHGIYGNPGKKGIPGFRGSPG
HPGEEGGIGERGPRGINGTHGDKGCPGVRGLKGARGYRGSQGERGIDGIDGIDGEKGEQG
SPGPSGEKGSTGRRGGKGPRGESGERGEPGLRGDHGDSGTDNYIRGHKGEKGKPGQQGEP
GTDGVQGGLGPKGSDGERGRRGAQGLQGIQGDLGEEGSPGISGPQGPQGSRGPGGISGLR
GTQGIPGCRGNPGPPGESGSIGNPGPRGRKGEPGAPGEKGLLGPPGSRGLPGLDGNDGLG
FQGEKGTKGVTGFPGLPGSQGEEGNPGSPGNKGSKGVRGRRGNAGIQGPMGNPGERGPPG
PMGTRGPLGIAAVAPCELVNFTRENCPCSSDKSKCPVYPTEVVFAFDMSEDVTQVAFAKM
RHVVLSLLKKIRISESNCPTGARVSIVSYNTNTQYLIRFSEFRNHKLLLEAVQSIPLERS
SGRRNIGMAMRFVARNVFKRIRQGVLTRRVAIFFANGPSQDAASINTAVLEFSALDIVPV
VIAFNEVPNVRHAFSNDDTGRFQLFVWENQQNEHLERIEYCALCYDKCKPDINCEVPFPP
PVMVNMDIAYIMDSSRHIASEEFETAKDFVSTMIDHFIIAPQPSLAGARVALVQQAPRDF
TPSSGRQPVNPEFDLVTYSSKNLMKKHIQESVHQLEGPSAIGHALQWTVENIFFKAPSPK
QYRVIFTIVGSKTSAWDRQKLKKAALEAKCQGFIMFTLALGNKVSDSELIDLSSSPTDQH
LLQMGRVLNLEMAYAEKFTWAFLNLLKREMNSYPTPELQEECERLDQGDAQEQVAVFESI
PFPQFDELDPGRSLEEREPTETTLLGEITETTQEPENVREKEYDYEGGEYFTEGHKEEGK
RKEYEGGQENNEENLEETVGTGTALTNHDACVVAQETGECQDYVLKWYYDKEQKTCGQFW
YGGCGGNKNRFETQEDCEALCVESS
NT seq 7638 nt   +upstreamnt  +downstreamnt
atggataactgcaaactacttcttattcttctcttcgcagctgccttctgtttcactgat
gcacagacaactgcttgcagaaaagccacctcagcggatattgtatttttagtggaaact
tcatcaagaattggccaggaaaactttcagaagatgaaggacttcctctacactttggtt
tcaagccttgaagttggtaatgatcaggtcagagttggattggcacagtacagccgtgag
ccatacaaagtgttcttgctgaatcaatattcattgaaaagtgatattttagaacagata
aagaatttgcccaatagaagtggaggaacttacaccggaacagctctggatttcattagg
acagaatatttcactagagctgctggtagcagagctgaggaaaatgtccctcaggtggtc
atactggtttctgttggggaatctaatgatgaggtcagaacacaagccaaggagctgaaa
gtcagaggcatctctttgtatgtggttggaataaatgaccgggatcctactgagcttaag
aaaatttccagcaggcctttcaagaagtttctgtttcgtactgacagttttgatggactt
caagatctctccactagccttttgcaaacaatgtgctttgcaattgagagccagattcaa
gcatttacaaagcactatggagatgttgttttccttgttgattcttctgtgcacatggga
tcttccacctttgagcaagtaaaacagttcgcctaccacgttgttgagcagctagacatt
gggatggataaattcaggattggcctggcccaatatagcacagaaagccagggagagttt
tttctgaacacctatgcaaacaaggaagatgtgcttaaccatatccaggagtatgttgct
ttcatggggggccctttacagacaggaagttccctgaagtttctatgtgaagcttttttc
acagaagatgctggaagccggtttagccaaggcactcctcagtttgcagtggtcatcaca
tctgctaaatcagaagatgaagtgctggaaagtgccctgaagctgaaagagatgggagtg
aaggtcatctcaattggtgtccagaattctgacaggcaagaaatggaggtgattgccacc
tccccctgggtttaccaggtagatgaaggagacagcatcagtcagctgcatcaggacatt
attaacattttggaaccaccagttcagcaacaccatgaaattatgaagatgccagaagtg
tgtgccactgtatccatagcagatattgtgttccttgtggatgaatccagcagcatcgga
ctgaggaattttaagctgataagagactttctgttcacaattatcaatgcactgcatatc
agccccaataatgtaagagttggcttggtgctatacagtgatgaaccaagactggaattc
actctggacacatttgagaacaaattggaaatcttgcactacttgcagaagttgccctat
cgtggtgggaaaacatacactggtgctgcgctagatttcctgaggaaagatgtttttact
cgaaaagcaggtagcaggaaaaaacaaggagtgcagcagatagctgtggttatcactggt
ggccaatccttggatgatttcaccaagtcggctactaaactacgacgcagtggagttgat
atctacgtcgtgggtacccagaatgcctttgagagtagccagctgaacaaaattgcatct
taccccacaaggaaacatgttgccaacctagaatcttttttgcagttatcaaacattggg
aggaaaattaagaaatggatttgtagtgaaatgatggtacaaagttttgcgatcccagtt
caaacacgaatgatgaaaaaaggttgtgttgagattgaggaagctgatatttatttcttg
attgatggctctggcagcataatgcccaacgatttccaggacatgaaaacattcatgaat
gagatgattgacgttttccaggtcggtgcagacagagtttgctttggtgtggttcagtac
gaaagcattcccaggacacaatttgagattggtcaatataacacaatggtgcagttaaag
gcagcagtgagagttattcaacagatgggcggtggcaccaaaactggagatgcattaaga
tatatgaaaagtctttttgcaaaggctagcaggaccaatgttccccagattctgatagtt
attacagatggtaagtcccaagatgaagtgacaagggcagcagaagagttgagacaagaa
ggaattattatatacgctattggtatcaagcaggcggtccaagaggagctgaaggacata
gcaagatcagaagatcgaatgttctttgtgaatgattttgattccctaaagcacatcaag
catgacattgtgcatgacatttgctcatcaaaggcctgtgagaatgtaaaagccgacatt
attttcctggttgatggctcggagagtatccaccctgttgattttcagaagatgaagaat
tttatacagttgattgtgaacaggtctgatattggtactgataaagttcggattgggttg
ctgcagttcagctcacaggcaaaagaagagttccagctgaacagctacagcaccaagcct
ggtctacggagagctatttcagaaatcaggcagctaagatcaggaacactgactgggaaa
gcccttgcttttgcctcatcttactttgacaaatccaaagggggaagacctgaaataaaa
cagtatctaataatgatcacagatggggaggcccaagattctgtgggtgagcctgctaaa
atgattagagacaaaggcattactgtctatgccatcggtgtactccaggccaatgagact
cagcttgtagagatttctggcacaccaggaaaagtgctctttgaggacaactttgattcc
ctcatctttttggaaaaacagattctttctgaaatttgcaagccagaggatttgtgcaaa
aggacagaagttgcagacatcatatttgtaatacatggatcgtcaagcattacagacttg
cagttcaagagtgtgcagcaactcatgatggctttggtaaatgactcagtggttggaaaa
aacaatgttcagtttggggctgtggtctatagcgttaattctaaggagcgtttctcactg
aatgagtactccactaaattggatgtcagagaagcaatatttaatttgagacccttacca
gaacaaggacttcagatctttacagcaagggctttgaactttaccagggaaagatttggt
gtggcttatggtggtcgcgcatcatctcgtggtctctctcaaatccttgtgcttattact
gatcggccaactgcaccttcagatagctacaatcttgcagcagtggcaaaatctttgaag
ctggatggcatcaacatctttgctgttggagtggaccgagcaagtcgaactgaactcgaa
cagattgtaggagaacgggagagggtgttatttgcactgagctacagtgatttggaaagt
ttacatggaaaccttgctcataagatatgtgacaaatcaaggccagtttgtgaaaatcaa
gcagcagacgttgtgttcttgattgacgggtcagaaagcatatcttccaaaaacttttct
accatgaagtccttcatgaaggaaatagtaagccgttttcacattgctgagaacaaagca
cgggttggagttgtccaatatagtgaagatcctcagaaagaattttatctcaatgaattt
tactcagagactgccataaaagaacagattgatagcattcgccagtttaaatcatccacc
ttcactggcaaaggactgaggtttgtcaagaggctttttgagcctgccaacggtggccgt
aaaaaccaaaatattccacagaccctcattgtgattactgatggatattctagcgatcca
gtgagtgaagcagcattggctcttaggaatgatggaatatacgtctttgcagtcggcatt
ggaattctaagagcaaccgaactgcttcaaattgctggtaatgtacaaagggtgtttttg
gtggaaaattttgcccgtctggaacgcatagagaggacgattgtcaaggaggtctgtgac
agtagcgatcgtccgagccaggattgcaacatagatgtttcagtgggaattgatgtttca
ggacctgtgagacctacacctgcactgcacttgaaaaagcaactgcaaactgatctgccc
agatttctgcaacaggtggagtccttgactaatgtctgctgcacttctgagtctcagctc
aacatcaggttcaagtaccaagtgtttgggccaactggcctacccctatttgactctaat
tttgaaaagtataatgaagagataatccaaaagttcttagctgcacagatcactgtggac
acatacctgaatgcacgcttcttacagttactttgggaggactcctttgaagtggcctca
gctaatgtgaaggttcttttagtgtttacagatgggctggatgatcctgtagaaatactc
agaatagcagcagattcccttctcctcaaaggccttgatgcacttctaatggttggcttg
gacaacatgccaaatctgagcgacctacaggaaatagaatttggcagaggacttggcaat
aagcaccccctgagcattagattttcagaccatccaggactcttgcaaagagaactcgaa
aatgttgctgaaagaaagtgctgtcatgttgcttgtaaatgttatggagaaattggtttt
catggtatctatggaaatcctggaaagaagggaattccaggtttcaggggatcccctgga
catcctggtgaggaaggtggaattggagaaagaggtcctaggggtatcaacggaactcac
ggagacaaaggatgcccaggtgttagaggtctgaagggagcaagaggctatcgaggaagc
cagggtgagagaggtattgatggcattgatggcatcgatggagagaagggagaacaaggg
tctcctggaccgtctggagaaaagggcagcacagggagacggggtggaaaaggccccaga
ggagaatcaggggagcgtggagagcctggcctaagaggagaccacggggattctggaact
gacaattatattcgtggccataagggtgaaaaaggaaaacctgggcagcagggagaacca
ggaacagatggagtacaaggagggctgggaccaaagggctctgatggtgaaagaggtcga
agaggtgctcaaggcttacagggtatacaaggagatttgggggaagaaggtagcccaggc
atctctggaccacaaggcccacagggctcaagaggtccaggaggcatcagtggacttcga
ggaacacaaggcataccaggctgtcgtggtaatccaggaccccctggggaatctggctct
attgggaatccaggacctagaggacgaaagggtgaacctggagctcctggagagaagggc
ttattgggaccccctggatcaaggggcctgcctggcctagatggcaatgatggccttggt
tttcaaggggaaaaaggaacaaagggagttactggattcccaggattgcctggttcacag
ggagaagaaggtaatccaggcagtccaggaaataaagggtccaaaggagttagaggaaga
aggggcaatgctggcattcaaggtccaatgggaaatccaggggaacgaggcccaccagga
ccaatgggcaccagaggaccattgggcattgcagctgtggcaccttgtgaacttgtcaat
tttacacgagaaaattgcccttgctcatcagataaaagcaaatgtccagtgtatccaact
gaagtggtgtttgcctttgatatgtctgaagatgtgacccaagtagcatttgcaaagatg
aggcatgtcgtgctgtcattgctaaagaagattaggatcagtgaaagtaactgcccgact
ggtgctcgtgtttccattgtttcatacaataccaacacgcagtatctcatcagattctcc
gaattccggaaccataagttattgctagaagcagtacagagcattcctttggagaggtcc
tcaggcagacgcaacattggcatggccatgaggtttgttgcaaggaatgtgttcaagcgg
attcgtcagggagttctcacaaggagagtcgccatattttttgccaatggcccctcacag
gatgctgcttccatcaacacggccgtactggagttcagtgccctggatattgttcctgtg
gttattgccttcaatgaggtgcctaatgtcagacatgccttttcgaatgatgacactgga
agatttcagctgtttgtttgggaaaatcaacaaaatgaacacttggagagaattgagtat
tgtgcactttgctatgataaatgtaaaccagatataaactgtgaggttcctttcccccct
cctgtcatggtgaacatggacattgcttatatcatggacagttctcgccacattgccagt
gaagaatttgagacagccaaagactttgtgagcactatgatagatcacttcattatcgcc
ccacagccttctctagcaggagctagagtagctctggtacagcaggctccaagagacttt
acacccagcagtggtagacagccagtgaacccagagtttgatctagtcacgtacagcagt
aaaaacttgatgaagaagcatatccaagaatctgttcaccaactggaagggccgtctgcc
attggtcatgccttacagtggacagttgagaacatatttttcaaagctcccagcccaaaa
caatacagggtcatatttacaatagttggaagtaagacgagtgcctgggacagacagaaa
ctgaaaaaggctgcactagaagccaaatgccaaggattcatcatgttcaccctagcactt
ggaaacaaagttagtgacagtgagctaatcgatctctcaagttccccaacagaccagcac
ttattgcagatgggcagggttttgaatcttgaaatggcatatgctgagaaatttacttgg
gccttcctaaatctactaaaacgtgaaatgaacagttaccctactccagaactacaagaa
gagtgtgaaaggctagatcaaggagatgcacaagaacaagtagctgtttttgaaagcata
cctttccctcaatttgatgaactggaccctggcaggagtttggaagaaagagagccaacg
gaaactacattattaggagaaattacagagactactcaggaacctgaaaatgttagagaa
aaagaatatgattatgagggtggtgagtatttcacagagggccataaggaagaaggcaag
aggaaggaatatgaaggaggccaagaaaacaatgaagaaaacttagaagagacagtagga
acaggaactgctctcactaaccacgatgcttgtgtggtggctcaggaaactggagaatgc
caggattatgttctgaagtggtactatgacaaagagcagaaaacatgtggacagttctgg
tatggtggctgtggaggcaacaaaaacagatttgaaacccaagaggactgcgaagcgcta
tgcgtagaatcttcctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (71)   
   KEGG ORTHOLOGY (1)   
   RefGene (67)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (8)   
   Pfam (8)   
All databases (93)   

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