KEGG   Caldicellulosiruptor bescii: Athe_0402
Entry
Athe_0402         CDS       T00857                                 
Name
(GenBank) transcriptional regulator, LacI family
  KO
K02529  LacI family transcriptional regulator, galactose operon repressor
Organism
ate  Caldicellulosiruptor bescii
Brite
KEGG Orthology (KO) [BR:ate00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ate03000]
    Athe_0402
Transcription factors [BR:ate03000]
 Prokaryotic type
  Helix-turn-helix
   LacI family
    Athe_0402
SSDB
Motif
Pfam: Peripla_BP_3 Peripla_BP_1 Peripla_BP_4 LacI HTH_3 HTH_24 HTH_23 MarR_2 HTH_AraC HTH_38 HTH_11 HTH_Tnp_ISL3 HTH_10 HTH_IclR HTH_28 HTH_Crp_2 HTH_29 MarR HTH_5 HTH_19 Sigma70_r4_2 HTH_36 HTH_7 HTH_AsnC-type HTH_26 Fe_dep_repress HTH_31 Sigma54_DBD Sigma70_r4 HTH_50 Crp HTH_8 Sigma70_r3 TetR_N Phage_terminase HTH_17 MerR TnsD Xre-like-HTH
Other DBs
NCBI-ProteinID: ACM59536
UniProt: B9MN80
Position
461939..462958
AA seq 339 aa
MRKNKNVTIKDIAKALGLSPSTVSRALNNYSDISPETRDKVIEMAKKLNYTPNIFAKSLV
TNKTKRVGLFIEDMEREGIYGVFYYEILISFRKAAMDNGYEVVLLSTSSEEQKRISFDAV
MQEKGLEGAFIMGLKMDDEYLNEIQKSTYPVVLLDIPIKNSNVGYVTTNNLKGAQLATEH
LINLGHKKIGFLNGHKKAYVSQERLNGYILALSKNGLQVDSELIYEGDFTEASGFKAADY
FVQKGVTAVFAASDMMAIGLIKRLKELGVDVPKKVSVVGFDDISLARYITPTLTTIRQNK
SEMGKSAFYLLLNLISKQPINHIILEPELVKRESTARLR
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgaggaagaacaagaatgtgaccataaaagatattgcaaaagctttgggactgtcgcca
agcactgtttcaagggcgctcaataattactcagatataagcccggagacaagagataag
gtaatagagatggccaaaaaactaaactacacaccaaacatctttgcaaaaagccttgtc
acaaacaagacaaaaagagtcggactgttcattgaagacatggagagggaaggcatatac
ggtgttttttattatgagatacttataagtttcaggaaagctgcaatggacaatggttat
gaggttgttttgctctcaacatcttcagaggaacaaaaaagaatctcttttgatgcggtt
atgcaggaaaaaggacttgaaggtgcatttatcatgggactcaaaatggatgatgagtat
ctgaatgaaatacaaaaaagtacctatcctgttgttttgcttgacattccaataaaaaac
tcaaatgtaggttatgtgacaacaaacaatctaaaaggtgcacagcttgcaacagaacac
ttgattaaccttggacacaaaaaaatagggtttttgaatggtcacaaaaaagcatatgtc
agccaagaaagattaaacggttatatattggcactgagcaaaaacggacttcaggttgac
agtgaacttatttatgaaggtgattttacagaggcaagcgggtttaaggcagcagactat
tttgtccagaaaggtgtcacagcagtttttgctgcatcagacatgatggcaatcggtctt
ataaaaagattaaaggaacttggtgtggatgtgcctaaaaaagtttcggttgtgggattt
gacgatatatccttggcacgttacatcacccccactcttacaacaataagacagaacaag
agtgagatgggcaaatcagccttttacttgcttttgaacctgatttcaaagcagccaata
aaccacattattttagagccagagcttgtaaaaagagaatcaacagcaaggctgcgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (39)   
   Pfam (39)   
All databases (77)   

Download RDF
DBGET integrated database retrieval system