KEGG   Arabidopsis thaliana (thale cress): AT3G18110
Entry
AT3G18110         CDS       T00041                                 
Symbol
EMB1270
Name
(RefSeq) Pentatricopeptide repeat (PPR) superfamily protein
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: PPR_2 PPR PPR_3 PPR_1 PPR_long TPR_24 RNPP_C
Other DBs
NCBI-GeneID: 821336
NCBI-ProteinID: NP_188439
TAIR: AT3G18110
UniProt: Q5G1S8
Position
3:complement(6204429..6209801)
AA seq 1440 aa
MAVSAGALAFPALSVRATLNPEIKDEQANISSTTSSSQKFTYSRASPAVRWPHLNLREIY
DSTPSQTLSSPVSPIAGTPDSGDVVDSIASREEQKTKDETAVATRRRRVKKMNKVALIKA
KDWRERVKFLTDKILSLKSNQFVADILDARLVQMTPTDYCFVVKSVGQESWQRALEVFEW
LNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGK
FSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITY
NTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELEL
KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL
ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI
CGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHT
PSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVA
ITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNL
SAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCK
SMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQ
SGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEE
LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIE
LLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEP
DETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLF
EELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSS
GNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIW
TCFVRAASFSKEKIEVMLLLKALEDIGFDLPIRLLAGRPELLVSEVDGWFEKLKSIEDNA
ALNFVNALLNLLWAFELRATASWVFQLGIKRGIFSLDVFRVADKDWGADFRRLSGGAALV
ALTLWLDHMQDASLEGYPESPKSVVLITGTAEYNGISLDKTLKACLWEMGSPFLPCKTRT
GLLVAKAHSLRMWLKDSPFCFDLELKDSVSLPESNSMDLIDGCFIRRGLVPAFNHIKERL
GGFVSPKKFSRLALLPDEMRERVIKTDIEGHRQKLEKMKKKKMGNETNGINTRRKFVRSK
NT seq 4323 nt   +upstreamnt  +downstreamnt
atggcggtttctgcaggggctttagcttttcctgctttatccgttcgcgccactcttaat
cctgagattaaagatgaacaagcgaacatcagcagcactacttcttcttcccagaaattc
acttacagtcgagcttctcccgccgtccgatggccacatttgaatctccgtgagatttat
gattccacaccttcacaaactctttcttctccggtttctcccatcgccggtacaccggat
tcaggtgatgtcgtcgattcaattgcctcccgcgaggagcaaaagacgaaagatgaaacc
gccgtggcgactcggagaaggagagtgaagaagatgaataaagtggcgttgattaaggct
aaagactggagagagagagtcaaatttctgacggataagattctaagcttgaaatctaat
cagttcgttgctgatattctcgatgctcgtcttgttcagatgactcctactgattactgc
ttcgtcgtgaaatcagttggtcaagagagttggcaacgagctcttgaggtttttgagtgg
ctcaatctccgtcattggcactctcctaacgctcggatggtggctgctatactcggtgtt
ttgggacggtggaatcaggaatcccttgcggtggagattttcactagggctgagccaacc
gtcggagatagggttcaggtgtacaacgcaatgatgggggtttattcacgtagtggtaag
ttttcgaaagcacaagagctggtcgatgcaatgcgtcagagagggtgtgttccagatctt
attagtttcaatactcttatcaacgctaggcttaaatctggtgggttgactccgaatttg
gctgttgagttattagatatggtgaggaattcgggtcttaggcctgatgctatcacttac
aacactcttcttagtgcctgttcgcgggattcgaatttggatggtgcagtgaaggttttt
gaggatatggaagctcatcggtgtcagcctgatttgtggacttataatgctatgatttct
gtttatggaagatgtgggcttgctgctgaagctgagaggctcttcatggagctggagctt
aaaggttttttccctgatgcagtgacatacaactctttgctgtatgcgtttgccagagaa
agaaatacggagaaggtgaaggaggtgtaccaacagatgcagaaaatggggtttgggaaa
gatgagatgacatacaacacgatcattcacatgtatggcaagcagggacaacttgatctt
gcgctacagctttataaggacatgaaaggtttgtcgggtaggaaccctgatgctattact
tacactgttttgatcgattctcttggaaaagcaaaccgaacagtggaagccgcagcttta
atgtctgagatgcttgatgttgggatcaaaccaactctgcagacatacagtgctcttatc
tgtggttatgccaaggctggaaagcgagaggaggctgaggatactttcagttgcatgttg
cgctcaggcactaaacctgataatttagcgtattctgtaatgttggatgtattactaaga
ggcaacgagacaagaaaggcctggggtttataccgtgatatgatttctgatggtcataca
ccgtcttacactctgtatgagttgatgatacttggacttatgaaggaaaacaggtcagat
gacattcagaaaaccatcagagacatggaagaattgtgtggcatgaacccactagagatt
tcatcagtgcttgttaagggcgaatgctttgatctcgctgctagacagttgaaagtggct
atcaccaatggctatgaattggaaaacgacactctattgtctatcctgggttcctatagt
tcatcaggcaggcattcagaagcgtttgagttacttgaatttttgaaagagcatgccagt
ggatctaaaagacttataactgaagctctaattgttctacattgcaaggtgaacaactta
agcgctgctctagatgaatatttcgctgacccatgtgttcatggctggtgttttggcagt
tccaccatgtatgagactctattacactgctgtgtagcaaatgaacattatgctgaagct
tctcaggttttctctgacctgagactatctggctgcgaagcttcagaaagtgtttgtaaa
agcatggttgttgtgtattgcaagcttggctttccagagacagctcatcaagtggttaat
caggctgagacaaaaggcttccactttgcttgttcgcctatgtatactgatatcattgag
gcttatggaaaacaaaaactatggcagaaagcggagagtgtggttggcaacctaagacaa
agtggacgaacacctgatctgaagacatggaacagcttgatgtcggcttatgctcagtgt
ggctgttacgagcgggcaagggctatttttaacactatgatgagggatggtccgtctcct
actgttgaatccatcaatattttgttgcatgctttgtgtgttgatgggagactcgaggag
ctctacgttgttgttgaagaattgcaagatatgggctttaagattagcaaaagctccatt
ctcttgatgcttgacgcatttgcccgagctggaaatatctttgaggtaaagaagatatac
agtagcatgaaagctgctggttacttacccacaatccgcctttataggatgatgattgag
cttctctgcaaagggaaacgagttagagatgctgaaattatggtctctgaaatggaagag
gccaatttcaaggttgagcttgctatatggaattccatgctgaagatgtatacggctatc
gaggattacaagaagacagttcaagtataccagaggataaaagaaactggactggaacca
gacgagaccacttacaatactctgattataatgtattgtagagacagacgaccagaagaa
gggtacttgcttatgcagcaaatgagaaatcttggtttggacccaaaactggacacatac
aagagcttgatctctgcttttggtaagcaaaaatgccttgaacaagctgaacaactgttt
gaagagcttctctcaaaaggtttgaaactagaccgttcattttaccacacaatgatgaaa
atatcccgagattctggaagcgactccaaggcagagaagttattgcaaatgatgaagaat
gcgggaatagaaccaacacttgctacaatgcatctgcttatggtttcatatagttcttca
ggaaatccccaagaagctgaaaaagttcttagtaacctgaaagacacagaagtggaacta
acaactctgccttatagttcagttattgatgcttaccttcggagcaaagattataacagt
ggaatagaaaggcttttggaaatgaagaaagagggcctagagccagaccacaggatatgg
acttgctttgttagggcggcgagtttctccaaggaaaaaattgaagtcatgttgctgctt
aaagctcttgaagatattggttttgatcttcctatcaggcttttagctggaagacctgag
ttgctagtttctgaggtggatggatggttcgagaaactgaaatccatagaggacaatgct
gctctcaattttgttaatgctcttttgaatcttctctgggcgtttgaactcagagctact
gcatcatgggttttccaattgggaatcaaaaggggtatcttcagtctcgatgtttttagg
gtggcggacaaggactggggtgcggatttcagaaggctgtctggaggtgcagcacttgtt
gccctgacgctatggcttgaccacatgcaggatgcatcactggaaggctacccagagtct
ccaaagtcagttgtcttaatcacagggaccgcagagtacaacggtatatcccttgataaa
acgctaaaggcgtgtctttgggaaatgggttctccatttcttccctgcaagacgagaacg
ggactgctagtggccaaagctcactctctcagaatgtggttgaaggactcgccgttctgc
ttcgacttggagctaaaagactcggtgtctttaccagaatcaaactcgatggacctgatt
gacgggtgtttcataagacgtggacttgttcctgcgtttaaccacatcaaagagagactt
ggtggatttgtgtcaccaaagaagttttcgagactggcgttgctaccagacgagatgaga
gagcgagtgataaagacagatattgaaggacatagacagaagttagagaagatgaagaag
aagaaaatgggcaatgaaacgaatggtattaacactcgaaggaagttcgtcagaagcaag
tga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (37)   

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