KEGG   Arabidopsis thaliana (thale cress): AT3G27730
Entry
AT3G27730         CDS       T00041                                 
Symbol
RCK
Name
(RefSeq) DNA helicase ROCK-N-ROLLERS
  KO
K15271  ATP-dependent DNA helicase HFM1/MER3 [EC:5.6.2.4]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ath03036]
    AT3G27730 (RCK)
Enzymes [BR:ath01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AT3G27730 (RCK)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    AT3G27730 (RCK)
SSDB
Motif
Pfam: Sec63 DEAD Helicase_C ResIII HHH_5 Cdd1 DNA_pol_lambd_f HHH T2SSE
Other DBs
NCBI-GeneID: 822395
NCBI-ProteinID: NP_001326060
TAIR: AT3G27730
UniProt: Q5D892
Position
3:complement(10273098..10280646)
AA seq 1133 aa
MDTHTLKSVSDLPGNFRSAFSFRYFNSLQSECFPLCFHSDINMIISAPTGSGKTVLFELC
ILRLFSKSISKEGSFLHAKGALKTVYISPSKALVQEKLRDWNQKFNSWGISCLELTGDNE
TYSTKNIQDADIILTTPEKFDAVSRYRVTSGGLGFFSDIALVLIDEVHLLNDPRGAALEA
IVSRLKILSSNHELRSSTLASVRLLAVSATIPNIEDLAEWLKVPTAGIKRFGEEMRPVKL
TTKVFGYAAAKNDFLFEKRLQNYIYDILMQYSKGKSALVFCSTRKGAQEAAQKLAQTAMT
YGYSNPFIKSREQLERLREASPMCSDKQMQSYILQGVGYHNGGLCQKDRSLVEGLFLNGD
IQVICTTNTLAHGINLPAHTVVIKSTQHFNKEKGHYMEYDRSTLLQMSGRAGRPPFDDTG
MVIIMTRRETVHLYENLLNGCEVVESQLLPCLIEHLTAEIVQLTISDITRAIEWMKCSYL
YVRMKKNPENYAIKKGIPKDRVEKHLQELCLQKINELSQYQMIWTDTDGFVLKPEEPGRL
MTKYYLKFETMKYIINTPTSYSLDEALHIVCHAEEISWIQLRRNEKKTLNDVNADKEGRL
RFHINDNKGKRKKRIQTREEKLFVLANDWLTGDPSVHDLSMTQDANSICSNGSRIARCMK
EYFIYKKNYKGTLSSTLLAKSLYQKLWDDSPYLLKQLPGIGMVTAKALHSMGVRSFEALA
EADPRRIEIVTGRKYPFGNTIKESLSSLPPKVEIKVEEVDCQKQGISKLAVTLSRVSQPL
QSTKRHYADLIVGSEEENLIHFHEKIRMEDFSSPYSVTVLLERPHQQTKVTVKADLIFEE
YIGIDLHETLLLKKANNNKVNYKSENRMPQYYPPMASACIADDDNPVTSGPSNRKDKKDD
MPSFKLIDDDSEEEKEPYVTMEEDDCVIINEHTVFDHIREKAKCFPSLNPLNPTSSPASG
KSILKRKSLVENNSPELDPLFQYDSVFDLPTNTKDIKQSAQQITSPGYASFAEKTETERP
FSDETIFNYIRKRSKNSPALATSKIENPITISSQEGRNAEISPYRTYGLLVSPATKIPRI
TSDAPSEILSFDISMVKRSDTSLEQTKGFCSTLAGKSNVSDSFLGFKSIFSFL
NT seq 3402 nt   +upstreamnt  +downstreamnt
atggatacacacacgctcaaatctgtctcagatttgcctggaaatttccgttcagctttc
agtttcagatactttaactcgctgcagagcgagtgctttccgctttgctttcactccgat
atcaacatgattatttctgcgccaacgggaagtggtaaaactgtactttttgagctttgc
attttgaggctcttctcaaagtccatctctaaggaaggaagttttctccatgctaaagga
gctcttaaaacagtttacatatctccgtctaaggctttagttcaggagaagctgcgtgat
tggaatcaaaagttcaattcatggggaatcagttgtttggagctgacaggtgataatgaa
acctacagcactaagaatatacaagacgcagatattatcttgaccacacctgagaaattt
gatgcagtaagccgttatcgtgttaccagtggaggattaggtttcttcagcgatattgcg
cttgtgctcattgatgaagttcacctactgaatgatccgcgtggagctgctcttgaggca
atagtcagtagattaaagattctttctagcaatcatgaactaaggtcaagtactttagcc
tctgtgcgtcttctggctgtctcagctactatcccaaacattgaagatctagctgaatgg
ctcaaggttcctactgcaggaattaagaggtttggcgaagaaatgagacctgttaagttg
acaacgaaagtttttggttatgctgctgccaagaatgacttcctctttgaaaagcgcctc
caaaactatatttatgacattttaatgcaatactcaaaaggaaaatctgccttagttttc
tgctcgacacgaaaaggcgctcaagaggctgcacaaaagctagctcagactgcaatgacc
tatggttactcaaatccatttattaaaagcagagaacaactggaacgattaagggaggct
tcgccgatgtgcagtgacaaacaaatgcaatcatatatcctccaaggcgttggttatcac
aatggtggactttgccaaaaggaccgcagcctcgtagaagggctcttcctgaatggagat
atccaagttatctgcacgaccaacactcttgcccatggaatcaacctgcctgcacataca
gtggtcattaaatcaactcaacatttcaacaaggaaaaaggtcactacatggaatatgat
cgttccactctactacagatgtctggcagggctggtcggcctccatttgatgacacggga
atggttattattatgacgagaagagagacggtccatctatatgagaatctcttgaatgga
tgcgaagttgttgagtcacaattgctgccatgcttaatagagcacctaaccgcagaaata
gtgcaacttactatctctgacattacacgggcaattgagtggatgaagtgctcatacctg
tatgtcagaatgaaaaagaatccggagaattatgctattaaaaaaggaattcctaaagat
cgggtagagaagcatttgcaagagctttgccttcagaagatcaatgagctttcacaatat
cagatgatctggactgacacagacggttttgttttgaaaccagaagagcccggaaggctg
atgacaaagtattatctaaagtttgaaacaatgaagtacattattaatacgccaacgagc
tatagcttggatgaggctcttcatattgtatgtcatgctgaagagatatcttggatacag
ctcagacgcaatgagaagaagaccttaaatgatgtaaatgcagataaagaagggcggctc
agattccacatcaacgataataaaggaaagcggaaaaaacgtatccaaaccagagaagag
aaactctttgtgcttgcaaatgattggttgactggggatccttcagtccatgatttatcc
atgactcaggatgctaactctatttgctcgaacggatccagaatagccagatgcatgaaa
gagtactttatatacaaaaagaattataaaggaactcttagctcaactcttcttgcaaaa
tcactctatcaaaagctctgggacgacagtccatatttgctgaaacaattgcctggcatt
ggaatggttacagctaaggcacttcattcgatgggagtcaggtcatttgaagctcttgca
gaagctgatccgcgaaggatagagattgttaccggccgaaaatatcctttcggaaatacc
atcaaggagtctctatcatcactacctccaaaagttgaaatcaaggtcgaggaagtggac
tgtcagaagcaagggatatctaaactagcagtcacattgtcacgggtatcacaacctctc
caatccacaaaacgccactacgctgacttgattgttggttcagaggaagagaatcttatc
cactttcatgagaaaataagaatggaggacttctccagtccctatagcgtaaccgtactc
ttggaaaggcctcatcaacaaacaaaggtgactgtgaaggctgatctcatctttgaagaa
tacattggtattgacctccacgaaacacttctactgaagaaggcaaacaacaacaaagta
aattacaaaagcgaaaacaggatgcctcagtattatcctcctatggcaagtgcctgcata
gcagatgatgacaacccagttacatctggaccttcaaaccgaaaggataaaaaagatgat
atgcctagtttcaagctcatcgatgatgattcagaagaagagaaagagccctatgtgaca
atggaagaagatgactgtgtcattatcaatgaacatacagtctttgaccacatacgtgaa
aaagctaagtgttttccttcattgaaccctttgaatccaacctcctctccagcatcagga
aaatcaattctgaaaaggaaaagcttagtggagaataattctcctgaactggatcctcta
tttcagtatgattctgtgtttgacttacctacaaatactaaagacatcaaacaaagcgca
cagcaaattactagcccgggttatgcaagctttgcagagaaaactgaaacagaaagacca
ttctcagatgaaacaatatttaactacataaggaaaaggtccaagaattctccggcactc
gccacatcgaaaatcgagaatcctataaccatttcttctcaagaaggaagaaacgcagag
ataagcccgtatagaacatatggattattggttagccctgctactaaaattccaaggatc
acatctgatgcaccttcagaaattctgtcctttgatatctcgatggtaaagagaagtgac
acgagcttagagcagactaaaggattctgctcgacacttgcaggtaagtccaatgtctct
gattcttttcttggatttaaaagcatcttctcttttctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (9)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (9)   
   Pfam (9)   
All databases (51)   

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