KEGG   Arabidopsis thaliana (thale cress): AT4G10160
Entry
AT4G10160         CDS       T00041                                 
Name
(RefSeq) RING/U-box superfamily protein
  KO
K19039  E3 ubiquitin-protein ligase ATL7/58/59 [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT4G10160
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT4G10160
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    AT4G10160
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4 zf-RING_5 zf-ANAPC11 zf-C3HC4_3 zf-RING_16 Baculo_RING Chordopox_A13L Orf78 zinc_ribbon_16 Prok-RING_1 PHD
Other DBs
NCBI-GeneID: 826607
NCBI-ProteinID: NP_192754
TAIR: AT4G10160
UniProt: Q9SN27 A0A178V3I2
Position
4:6335919..6337478
AA seq 225 aa
MSFIDPRTYIPSNSTESQILKFTFIVCVPICVILIVLLVLYIMRRNSNTNVDWSSLGGFV
PTNNNLSTAELGLSKDIREMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTF
HMECIDLWLTSHTTCPLCRLSLIPKPSVDLSHQSIEIVSSIENTNGGEASTQPDSQSATE
AIIHIDDVEEGNRDSIEVVKESEENDRNSVGTSDGCCSCRLGEKA
NT seq 678 nt   +upstreamnt  +downstreamnt
atgtctttcatcgacccaagaacttacattccatcgaactcaactgaatcccagatactg
aaatttacgtttatcgtctgtgtgccaatctgtgtcatattaatcgtcctcctcgttctt
tatatcatgcgtcgaaacagcaataccaacgttgattggtcttctcttggtggcttcgtg
cccaccaacaataatctctcaacggctgaattaggactgagcaaagacataagagagatg
cttcccattgttatctacaaggagagtttcactgtcaacgatacacaatgttcagtgtgt
cttggggactaccaagcagaagagaaactccaacaaatgccatcatgtgggcacactttc
cacatggaatgtattgatctatggctcacatcgcacacaacatgccctctttgtcgtctc
tcccttatccccaaaccgtccgtagacctgtcccatcaaagcatagagattgtatcttcc
atagaaaacactaacggaggagaagcttcaactcaaccagattcccagtcagcaaccgaa
gcaataattcacatcgatgatgtcgaagaaggtaaccgagatagtatagaggtcgttaag
gaatcggaagagaatgacagaaacagcgtagggacatctgatggttgttgtagttgtaga
cttggtgaaaaagcgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (47)   

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