KEGG   Arabidopsis thaliana (thale cress): AT5G16620
Entry
AT5G16620         CDS       T00041                                 
Symbol
TIC40
Name
(RefSeq) hydroxyproline-rich glycoprotein family protein
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: STI1-HOP_DP RPN13_C Na_Ca_ex
Other DBs
NCBI-GeneID: 831524
NCBI-ProteinID: NP_197165
TAIR: AT5G16620
UniProt: Q9FMD5 A0A178UEV6
Structure
Position
5:5450620..5454577
AA seq 447 aa
MENLTLVSCSASSPKLLIGCNFTSSLKNPTGFSRRTPNIVLRCSKISASAQSQSPSSRPE
NTGEIVVVKQRSKAFASIFSSSRDQQTTSVASPSVPVPPPSSSTIGSPLFWIGVGVGLSA
LFSYVTSNLKKYAMQTAMKTMMNQMNTQNSQFNNSGFPSGSPFPFPFPPQTSPASSPFQS
QSQSSGATVDVTATKVETPPSTKPKPTPAKDIEVDKPSVVLEASKEKKEEKNYAFEDISP
EETTKESPFSNYAEVSETNSPKETRLFEDVLQNGAGPANGATASEVFQSLGGGKGGPGLS
VEALEKMMEDPTVQKMVYPYLPEEMRNPETFKWMLKNPQYRQQLQDMLNNMSGSGEWDKR
MTDTLKNFDLNSPEVKQQFNQIGLTPEEVISKIMENPDVAMAFQNPRVQAALMECSENPM
NIMKYQNDKEVMDVFNKISQLFPGMTG
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggagaaccttaccctagtttcttgctcagcttcttctccaaagctgttaattggatgc
aatttcacttcctcgctgaaaaaccctactgggttttctcgtcggactcctaatattgtc
ctccggtgttccaaaatatctgcctctgctcaatctcaatctccctcttcgcgtccggag
aacactggagaaatcgtggttgtgaaacagagaagcaaagcttttgcaagtatattttct
tcgagtcgtgatcaacagacaacttctgttgcttcccctagtgtgcctgtgccaccacca
tcttcatcaaccataggatcaccacttttctggattggtgttggtgttggtctatcagct
ttgttctcatatgtaacttcaaatttaaagaaatatgcaatgcaaacagctatgaagacg
atgatgaaccaaatgaatacgcaaaatagccagtttaataattctggattcccatcagga
tcaccttttccgtttccatttcctcctcaaacaagtcctgcttcctcgccattccaatct
caatcccagtcttcaggtgctaccgttgatgtgacagcgacaaaagtagagacacctcct
tcaactaaaccgaaacctacacctgcaaaggatatagaggtggataagccaagtgttgtc
ttagaggcaagcaaagagaagaaagaagaaaagaactatgcctttgaagacatttcaccc
gaggaaaccacaaaagaaagcccatttagcaactatgcagaagtctctgaaactaattcc
cccaaagaaactcgcttgtttgaggatgtcttgcaaaatggagctggtccggcaaatggt
gccactgcttcagaggtttttcaatctttgggtggtgggaaaggagggccgggtttatct
gtagaagctttagagaaaatgatggaagatccaacagtccagaagatggtttacccatac
ttgcctgaggagatgaggaacccagaaactttcaaatggatgcttaaaaatcctcagtac
cgtcaacaactacaggacatgttgaataatatgagtgggagtggtgaatgggacaagcga
atgacagatacattgaagaattttgacctgaatagtcctgaagtgaagcaacaattcaat
caaataggactaactccagaagaagtcatatctaagatcatggagaaccctgatgttgcc
atggcattccagaatcctagagtccaagcagcgttaatggaatgctcagagaacccaatg
aacatcatgaagtaccaaaacgacaaagaggtaatggatgtgttcaacaagatatcgcag
ctcttcccaggaatgacgggttga

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Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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