KEGG   Trichormus variabilis: Ava_4983
Entry
Ava_4983          CDS       T00277                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
ava  Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:ava00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ava03016]
    Ava_4983
Enzymes [BR:ava01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     Ava_4983
Transfer RNA biogenesis [BR:ava03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Ava_4983
 Prokaryotic type
    Ava_4983
SSDB
Motif
Pfam: TruB_N TruB-C_2 TruB_C_2 DKCLD
Other DBs
NCBI-ProteinID: ABA24580
CyanoBase: Ava_4983
UniProt: Q3M356
Position
6264084..6264965
AA seq 293 aa
MQGFINLDKPFGWTSHDCVARLRKMLRLKRVGHAGTLDPAATGVLPIAVGKATRLLQYLP
SDKAYKATVRFGVQTTTDDLQGEIISSQPCGGLSLSEVKTSLSQFIGKIEQIPPIYSAIQ
VEGKRLYDLARKGETIEVPARTVEVFSIDVLDWREGDFPELDVAIACGSGTYIRAIARDL
GAIFHTGGTLAALIRTHSSGFNLTDSLTLTDLETQLQAGTFEPTPADAALQYLPSVTLPS
ISAQKWCQGQRIELNLETVGKVRVYQAETNIFLGIGELQTGVLIPQMVFEPIS
NT seq 882 nt   +upstreamnt  +downstreamnt
atgcaaggttttattaatttagacaaaccatttgggtggacttcccacgactgtgtagca
cggttaagaaaaatgttacgcctcaaacgagtgggacacgcaggaacattagatccagca
gctactggggtgttacctatcgcagttggcaaagctacaaggttattacaatatctgccc
agtgacaaagcttataaagctacagtccgttttggtgtgcagacgacaacagacgatttg
caaggtgaaattattagttctcaaccttgtgggggattgagtttatctgaagtaaaaact
tcgctttcccaatttatcggtaagattgaacaaataccacccatttacagtgcaattcaa
gtagaagggaaacgcttatatgatttggcgcgtaaaggtgaaacaatagaagtgccagcg
cggactgtagaagtttttagtatagacgttttggattggcgggaaggagattttcccgaa
ttggatgtggcgatcgcctgtggtagtggtacatatattagagcgatcgctcgtgattta
ggtgcaattttccacacaggtggaactctcgccgctttgatccgcactcacagcagtggc
tttaatttaacagatagtctcaccttgacggacttagaaactcaactgcaagctgggact
tttgaaccaacccccgccgatgcagctttgcaatatttaccgtcagttaccctacctagc
atctctgcacaaaaatggtgtcagggacagcgaattgaattaaatttagaaactgttggt
aaagtgcgcgtttatcaagcagaaaccaatattttcttgggtattggagaattacaaact
ggtgtgttaattcctcaaatggtgtttgaaccgatttcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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