KEGG   Aeromonas veronii TH0426: AMS64_01175
Entry
AMS64_01175       CDS       T04529                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
avo  Aeromonas veronii TH0426
Pathway
avo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:avo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AMS64_01175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:avo03400]
    AMS64_01175
Enzymes [BR:avo01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     AMS64_01175
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AMS64_01175
DNA repair and recombination proteins [BR:avo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AMS64_01175
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS Ribosomal_S13 NFACT_N
Other DBs
NCBI-ProteinID: AMQ41102
Position
257885..258697
AA seq 270 aa
MPELPEVEVSRQGISPWLTGIKVTRVVVRDGRLRWPIPGEIQELVDLTIYRVRRRAKYLL
LETDFGTAILHLGMSGSLRVLDIGTLAEKHDHVDIELENGKLLRLNDPRRFGALLWTREP
AEAHALLAKLGPEPLTDAFSADYLQGRAKGRSTAIKQFLMDNQVVVGVGNIYANEALYAA
GIHPKRAAGNISAERLGTLVAEIKRVLAEAIRQGGTTLKDFTSADGKPGYFVQQLQVYGR
GGQPCFHCHTLLTETRIGQRTTVFCSHCQR
NT seq 813 nt   +upstreamnt  +downstreamnt
atgcccgaattgccagaagttgaagtcagtcgtcaggggatctccccctggctcaccggt
atcaaggtgacgcgtgtggtggtgcgggatggccgcctgcgctggccgatccccggtgag
attcaggagctggtggacctcaccatctatcgggtgcgtcgccgtgccaaatacctgctg
ctggagaccgatttcggcacagcaatcctccatctggggatgtccggcagtctgcgggta
ctggatatcggcactctagccgagaagcacgaccacgtggatatcgagctggagaatggc
aagctgctgcggctcaacgatccgcgccgtttcggcgccctgctctggacccgcgaaccg
gccgaagcccacgcgctgctcgccaagctggggccagagccgctcaccgatgccttcagt
gctgattacctgcaggggcgcgccaaggggcgcagcaccgccatcaaacagttcctgatg
gacaatcaggtggtggtcggggtgggcaacatctacgcgaacgaggcgctctatgctgcc
ggcattcaccccaaacgggcggcgggcaatatcagtgccgagcggctgggaaccctggtg
gccgagattaagcgcgtgttggccgaggcgattcgccaaggcggcactaccctcaaggat
ttcaccagtgccgatggcaagccgggctatttcgtgcagcagttgcaggtctacggccgt
ggcggtcaaccctgtttccactgtcataccctgctgaccgagacaagaataggccagcgc
accacggttttttgcagtcattgccagcgctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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